Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq19711 136 4e-27 seq20137 122 8e-23 seq20138 105 6e-18 seq5918 100 3e-16 >seq19711 Length=592 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||| || | || || ||||| | ||||| ||| | |||||| | || | ||| | Sbjct 137 AAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACCC 196 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| || | || || ||||| ||||| ||||| || ||||||||| Sbjct 197 TCAGACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGAT 256 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| |||||||| | || || ||| |||||||||| | |||| |||||||||| Sbjct 257 CAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACTAC 316 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||| ||| | || |||| || ||| | |||||||| Sbjct 317 AACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGG 366 Score = 118 bits (130), Expect = 1e-21 Identities = 161/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||| || | || || || || | ||||| || | |||||| |||| | || | Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| ||| | ||||| ||||| ||||| ||||| || || ||||||||| Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| || | || ||| || ||| | ||||||| |||| | ||||| || Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGA 26993 |||||||| ||||| ||| |||| ||||| |||||||||||||| Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTTGAGACTTAGAGGA 592 >seq20137 Length=989 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | ||||| ||| | |||||| | || | || | Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | || || |||||| ||||||||||| || || ||||||||| Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGATCAA 273 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 | ||||| || | || || ||||| || ||||||| ||||| | | ||||| ||| Sbjct 272 TAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAAC 213 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| || || || |||| ||||| | ||||| ||||| || Sbjct 212 ATTCAAAAGGAGTCAACCCTCCACTTGGTCTTAAGACTCAGAGGTGG 166 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || |||||||| | ||||| | || | || | | |||||||| Sbjct 611 TTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACCATT 552 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||| || |||||||| || || ||||||||||| ||| | Sbjct 551 GAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGATTG 492 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 |||| || ||| || ||||| || |||| |||| | || ||||||||||| | ||| Sbjct 491 ATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTCTCTGACTATAACATCTAGAAA 432 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | || ||||||| ||||| ||||| || Sbjct 431 GAATCAACTCTTCACTTGGTCCTCAGACTAAGAGGTGG 394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| || | || ||||||||| | || ||||| | || || |||| |||| || Sbjct 851 AAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCA 792 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| || ||| | ||||| ||||| ||||| || || || || || ||| Sbjct 791 TCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAT 732 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||| | |||||||| | | || || || | ||||| | |||| | | || || Sbjct 731 CAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTAC 672 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || |||||||| || | || ||||| |||||||||||||||| Sbjct 671 AATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 622 >seq20138 Length=732 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || |||||||| | ||||| | || | || | | |||||||| Sbjct 354 TTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACCATT 295 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||| || |||||||| || || ||||||||||| ||| | Sbjct 294 GAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGATTG 235 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 |||| || ||| || ||||| || |||| |||| | | ||||| ||||||||||| Sbjct 234 ATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTTTCTGACTACAACATTCAAAAG 175 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || |||| |||| || ||||| ||||| || Sbjct 174 GAGTCAACCCTCCACTTGGTTCTCAGACTCAGAGGTGG 137 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| || | || ||||||||| | || ||||| | || || |||| |||| || Sbjct 594 AAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCA 535 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||||| || ||| | ||||| ||||| ||||| || || || || || ||| Sbjct 534 TCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAT 475 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||| | |||||||| | | || || || | ||||| | |||| | | || || Sbjct 474 CAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTAC 415 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || |||||||| || | || ||||| |||||||||||||||| Sbjct 414 AATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 365 >seq5918 Length=2920 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||| | | || || || || || || || || |||| || | || | ||| | Sbjct 2821 AAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACCC 2762 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| ||| | || || |||||| ||||||||||| || || || ||| Sbjct 2761 TCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGAT 2702 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 ||||| ||||| || | | || || || | ||||||| |||| | | ||||| Sbjct 2701 CAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTAC 2642 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||| ||||| ||| ||||| ||||| ||||||| ||||| || Sbjct 2641 AATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAGACTCAGAGGTGG 2592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478510478537520