Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq19711 102 7e-17 seq20138 100 2e-16 seq20137 100 2e-16 seq5918 91.5 1e-13 seq3881 84.2 2e-11 >seq19711 Length=592 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||| || ||||| || | || || || || |||| || || || || | | Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || |||| || || | |||||||| |||||||| ||||||||| Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| || ||||| || || || || ||| | || | || || ||||| Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 |||||||| |||||||| | || || || ||| || Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTTGAGA 583 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||||||| |||| || |||||||| | || || ||||| |||| | || || ||| Sbjct 135 TAAAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAAC 194 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 || | || ||| | || | | || || || ||||||||||| ||||| || |||| Sbjct 195 CCTCAGACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCG 254 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 ||||||| | || || || || || ||| | | || || | || || ||| | Sbjct 255 ATCAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACT 314 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||| ||||||||||| || | || || ||| | ||||| | |||||| Sbjct 315 ACAACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGGT 367 >seq20138 Length=732 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||| |||| || || ||||| | ||||| || || | ||||| || || || Sbjct 596 TAAAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGC 537 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || || | || | |||| || || ||||||||||||||||| ||||| | Sbjct 536 CATCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTG 477 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 ||||| | | || || ||||| || || | ||||| || | | ||| | || |||| Sbjct 476 ATCAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATT 417 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || |||||||| ||| | || || || ||| || | | |||||| Sbjct 416 ACAATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGGT 364 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| | || || ||||| ||||| || || || || |||||||||| || || | | Sbjct 363 ATGTAGATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGT 304 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||| || || ||||| |||||||||||| Sbjct 303 GACACCATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAA 244 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || || | |||||| | ||| | || || |||||| Sbjct 243 CAGAGATTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTTTCTGACTACAAC 184 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||||||| || || ||| | || || ||| Sbjct 183 ATTCAAAAGGAGTCAACCCTCCACTTGGTT 154 >seq20137 Length=989 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 |||| ||| |||| || || ||||| | ||||| || || | ||||| || || || Sbjct 853 TAAAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGC 794 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || || | || | |||| || || ||||||||||||||||| ||||| | Sbjct 793 CATCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTG 734 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 ||||| | | || || ||||| || || | ||||| || | | ||| | || |||| Sbjct 733 ATCAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATT 674 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || |||||||| ||| | || || || ||| || | | |||||| Sbjct 673 ACAATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGGT 621 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| || | || |||||||| |||| | || || || || | Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || ||| | ||||| || || ||||| ||||||||| Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGATCAA 273 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 | | ||||| || || || |||||| |||| ||| | ||| | || || |||||| Sbjct 272 TAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAAC 213 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||||||| || || ||| | || || || || Sbjct 212 ATTCAAAAGGAGTCAACCCTCCACTTGGTCTT 181 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| | || || ||||| ||||| || || || || |||||||||| || || | | Sbjct 620 ATGTAGATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGT 561 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || |||| || || ||||| |||||||||||| Sbjct 560 GACACCATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAA 501 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || ||||| || || | |||||| | ||| |||| || || ||| Sbjct 500 CAGAGATTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTCTCTGACTATAAC 441 Query 22399 ATTCAAAAAGAATCCAC 22415 || | |||||||| || Sbjct 440 ATCTAGAAAGAATCAAC 424 >seq5918 Length=2920 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 ||||| ||| | || || || || ||||| || || || ||| | ||||| || || ||| Sbjct 2823 GTAAA-ATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAA 2765 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 || | || ||| | || | | || || ||||||||||| || || || || || Sbjct 2764 CCCTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCT 2705 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 |||||||| | || || ||||| || || | || || ||| | ||| | || || Sbjct 2704 GATCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGAC 2645 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 ||||| || ||||| |||||||| | ||||| || ||| || Sbjct 2644 TACAATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAGA 2603 >seq3881 Length=979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 || |||||||||||| ||||||||| | | | ||||||| | | | | || || || Sbjct 372 TGGAAAGATGCAAATCTTTGTTAAATCAATCAGCGGTAAATCCTTGGCAATCGATGTTGA 313 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 |||| ||||| || || | ||| ||| ||| | | || ||||| || || | Sbjct 312 GCCCACTGATACAGTTGAGAGCGTTAAATCAAAGATTAATGCCAGAGAGGGCATCCCTGC 253 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 ||||| | | || |||||||| || |||||| |||||||| | | | | ||||| Sbjct 252 TGATCAGTAGAGGCTGATATTTGCTGGAAAACAGCTAGAGGATAATAGGATGATATCCGA 193 Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || |||||||| || || || | ||| | |||| | ||||| Sbjct 192 TTACAATATAGCTAAAGAATCAACTATCTATCTTGTTCTCAGATTAAGAGGAGG 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419598113989915