Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq19711 134 1e-26 seq5918 98.7 8e-16 seq20137 96.9 3e-15 >seq19711 Length=592 Score = 134 bits (148), Expect = 1e-26 Identities = 173/238 (73%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 114145 ATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGT 114204 ||||||| |||| || | | ||| | ||| || || | || ||||||||||| |||| Sbjct 375 ATTTACA--TACCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGT 318 Query 114205 TGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTT 114264 |||| ||||| | ||| | ||||| |||| ||| |||||| ||||||| | ||||| Sbjct 317 TGTAGTCGCTGAGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTT 258 Query 114265 GGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 | || ||||| || ||||| ||||| ||||| || | | ||||| |||||| | Sbjct 257 GATCGGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTG 198 Query 114325 TGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||| ||||||| ||| | |||||||| || || ||||| || || || | ||| Sbjct 197 AGGGTTCAACGTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACAT 140 >seq5918 Length=2920 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGT---AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAA 114209 |||||||||| | |||||||| || ||||| | || ||||| ||||| || ||||| Sbjct 2586 ATACCGCCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAG 2645 Query 114210 TCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 || || || | |||||| | || || || || |||| || | |||||| || Sbjct 2646 TCAGACAAGGTTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCA 2705 Query 114270 GGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGAT 114329 || || || ||||||||||| |||||| || | | || | |||||| | || | Sbjct 2706 GGGGGGATTCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGT 2765 Query 114330 TCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || ||||| | || | ||| ||||| |||| ||| || || || |||| ||| Sbjct 2766 TCAACGTCTAGAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACAT 2818 >seq20137 Length=989 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 ||||| || || || || | || || || |||||||||||||| || | || | | Sbjct 175 AGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTA 234 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||| || |||||||||||| |||| || | || ||| || || ||||| |||||| Sbjct 235 CCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCTTCT 294 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| || | | || | ||||| | || || || || | ||| Sbjct 295 TTGTCCTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAAGGTG 354 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || || || ||||| || ||||| Sbjct 355 ATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420004388228292