Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5918 156 1e-32 seq20137 125 2e-23 seq19711 116 9e-21 seq20138 113 1e-19 >seq5918 Length=2920 Score = 156 bits (172), Expect = 1e-32 Identities = 188/254 (74%), Gaps = 9/254 (4%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | |||||| | || | ||| | ||| ||| ||||||||||| ||||| | Sbjct 2592 CCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGAC 2651 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| |||| |||||||| |||||||| | ||||||| | ||| Sbjct 2652 AAGGTTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGG 2711 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||||||| || || || || || |||||||| ||||| | || | ||| || Sbjct 2712 ATTCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACG 2771 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTA-TTCTA 288485 || || || |||||||| || |||| ||||||||||||||||| |||| ||| ||||| Sbjct 2772 TCTAGAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACATT---TTACTTCTA 2828 Query 288486 ATATTTTTAATAAT 288499 ||||||||| Sbjct 2829 -----TTTAATAAT 2837 >seq20137 Length=989 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || | |||| || |||||| | ||| |||||||| | | Sbjct 394 CCACCTCTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAG 453 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||| ||||| ||||| |||| | ||||||| |||| Sbjct 454 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 513 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| | ||| || || || || ||||| || | || || | || || Sbjct 514 ATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACG 573 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || |||| |||||| ||||| |||| ||| Sbjct 574 TCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| |||||||| || || | || || | ||||||||||||| ||||| || || Sbjct 657 TTCTTTCTGGATATTGTAATCAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAA 716 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || |||| | |||||| || || || || ||||| || || || ||||| Sbjct 717 GATGAGTCTCTATTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 776 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||||| ||||| || || ||||| ||||| || || || || Sbjct 777 CTCAATAGTGTCAGATGGCTCTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTAC 836 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 837 GAAGATTTACATT 849 >seq19711 Length=592 Score = 116 bits (128), Expect = 9e-21 Identities = 174/245 (71%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | |||| || |||||||||||| || |||||| ||| || | ||| Sbjct 355 TCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTGAGAGTTCTTCC 296 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 |||||| | || |||||| |||||||| || | ||||||| ||||| ||||| || Sbjct 295 GTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGGATACCTTCCTT 236 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 || ||||| || || ||||||||||| || | || | ||| || || | ||||| Sbjct 235 GTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACGTCCAAGGTGAT 176 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA---TTATGTTATTCTA-ATATTTTT 288493 || || || || || || || ||||| || | || ||| || ||| || | ||| || Sbjct 175 AGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACATCTTTAAGTGATTATAGAAATTATT 116 Query 288494 AATAA 288498 |||| Sbjct 115 TATAA 111 >seq20138 Length=732 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | |||||| || || | || | || || ||||| || || ||||| | Sbjct 137 CCACCTCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 196 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||| || || | ||| ||||| ||||| |||| | ||||||| |||| Sbjct 197 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 256 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| | ||| || || || || ||||| || | || || | || || Sbjct 257 ATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACG 316 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || |||| |||||| ||||| |||| ||| Sbjct 317 TCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 Score = 109 bits (120), Expect = 1e-18 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| |||||||| || || | || || | ||||||||||||| ||||| || || Sbjct 400 TTCTTTCTGGATATTGTAATCAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAA 459 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || |||| | |||||| || || || || ||||| || || || ||||| Sbjct 460 GATGAGTCTCTATTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 519 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || | ||||| ||||| || || ||||| ||||| || || || || Sbjct 520 CTCAATAGTGTCAGATGGCTCTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTAC 579 Query 288462 GAATATCTGCATT 288474 ||| || | |||| Sbjct 580 GAAGATTTACATT 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179270632250098