Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq10356 167 3e-36 seq5752 93.3 5e-14 >seq10356 Length=2916 Score = 167 bits (184), Expect = 3e-36 Identities = 247/350 (71%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 114286 ATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGC 114345 ||| |||| |||| ||||| || ||||| || | ||||||| ||||||| | | ||| Sbjct 1802 ATCAGCGAATCCTTAAACACCAAGTCCAATGGGTCTATGTCTCTTATTAGAATATTCAGC 1743 Query 114346 GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 114405 || || ||||| | |||| ||| || ||| |||| |||||||| || | ||| Sbjct 1742 CTCCTTGACTGGATAGTAGTTCCCATCAATCACCTTATTCAGATTTTTAGTTATTCTCTT 1683 Query 114406 TGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGG 114465 ||| | | |||||| || |||||||| | ||||||| || |||||| | || Sbjct 1682 TGTTACTGAATGAAGTAAATCATAATCAAACTCTCTTGTCTCTTTCTTTACATACCTTGG 1623 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 || || | ||| |||| ||||| |||| ||||| | || || || | ||| Sbjct 1622 TAGTGCTACTGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGATGTATATTCAACAAT 1563 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 ||| ||||||||||||||||| || || || ||||| || | | || |||||| | || Sbjct 1562 TTCAGTACACAAATTTGAACTTTTTATTGTTCCCAAATTTTGCTAGTTAGACTTTCTATT 1503 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 114635 |||| ||||||||||||||| || || || || ||||| ||| |||| Sbjct 1502 GCACGTATCCTTGTAAAGCATATAGGGTGTACCAGTCTCTAGTTGTGACT 1453 >seq5752 Length=1520 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| ||||| ||||| || ||||| ||||| || |||||||||||||| ||||| Sbjct 533 CCCTCATCACGAGAGATAAGCTCATTTGAGAAAGTGAGGCCTGGCATGAGACCACGCTTT 592 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || || || ||||| ||||| || | | ||||| Sbjct 593 TTTAGCCAGAAGATTGAGCAGAAAGACCCTGAAAAGAAAATTCCTTCAATAGCAGCGAAA 652 Query 126185 GCAAAGAGACGCTCAGCAAAG 126205 |||| ||| | |||||| || Sbjct 653 GCAACGAGTCTTTCAGCATAG 673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597164007434280