Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq20137 86.0 7e-12 seq19711 86.0 7e-12 seq20138 84.2 2e-11 >seq20137 Length=989 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| |||| | || | | || |||||||| ||||||||||| Sbjct 201 CTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAA 260 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||| || || |||| || | | || |||||| || || || | | Sbjct 261 GATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTCCTAAATCTTGGCCTTAACATT 320 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| | || ||||| | ||||||||||| || || || ||||| || Sbjct 321 CTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAAC 380 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 381 AAAGATTTGCAT 392 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | ||| ||||| || | || || || || ||||||||||||| Sbjct 621 ACCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGA 680 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| |||| | ||| ||||| || ||||||| || || || | ||| Sbjct 681 TAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGG 740 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| || |||| || | | ||||| | || || Sbjct 741 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTAC 800 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||||| || || || || || || || || ||||| ||||||| |||||| Sbjct 801 ATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 851 >seq19711 Length=592 Score = 86.0 bits (94), Expect = 7e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 41984 TCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAG 42043 |||||| | | ||| ||||| || | ||| ||||||||||||||||| |||| || Sbjct 592 TCCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAG 533 Query 42044 AGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCAC 42103 || | | || || | ||||| || ||||| || |||| || || |||| || | Sbjct 532 TGTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAAT 473 Query 42104 GCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATC 42163 | ||||||||| ||| || |||| || | | || || | || ||||| Sbjct 472 ACCTTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATC 413 Query 42164 GACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||||||| ||||| || || ||||| || ||||||| ||| Sbjct 412 GAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 >seq20138 Length=732 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| | | ||| ||||| || | || || || || ||||||||||||| Sbjct 364 ACCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGA 423 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| |||| | ||| ||||| || ||||||| || || || | ||| Sbjct 424 TAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGG 483 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| || |||| || | | ||||| | || || Sbjct 484 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTAC 543 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||||| || || || || || || || || ||||| ||||||| |||||| Sbjct 544 ATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543040391047440