Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq5918 93.3 4e-14 seq20138 86.0 6e-12 seq19711 86.0 6e-12 >seq5918 Length=2920 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| || ||||| || | | ||| | | ||||| | | ||| || Sbjct 2622 GTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTTCCATCTTCCAATTACTTTCCT 2681 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || | ||| || || || || ||||||||||| ||||| || || ||| Sbjct 2682 GCAAAGATCAGTCTCTGTTGATCAGGGGGGATTCCTTCTTTGTCTTGAATCTTGGCCTTC 2741 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || ||| || || || |||| ||| | |||||||| |||||||| Sbjct 2742 ACGTTCTCTATGGTGTCAGAGGGTTCAACGTCTAGAGTAATCGTCTTGCCCGTCAAAGTC 2801 Query 64427 TTTACGAAAATTTGCATTTTA 64447 || ||||| || | ||||||| Sbjct 2802 TTGACGAATATCTACATTTTA 2822 >seq20138 Length=732 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || |||||||||||||| || | | ||| | | || ||||| ||||| ||| Sbjct 167 GTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTTCCATCCTCAAGTTGCTTTCCG 226 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | | ||| || ||||| || || |||||||| |||| || || ||| Sbjct 227 GCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTAGATCTTAGCCTTG 286 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || |||| | || || || | ||| | ||||| || |||||||| Sbjct 287 ACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTCTTTCCAGTCAAAGTC 346 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || | ||| Sbjct 347 TTAACGAAGATCTACAT 363 >seq19711 Length=592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/234 (68%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||||||||| || | |||| || ||||||||||| |||||||| || Sbjct 367 ACCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCT 308 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | ||||||| || | || || || | ||||| | ||| || |||||||| Sbjct 307 GAGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGG 248 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| || || | || || || || || Sbjct 247 GATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAAC 188 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT-TTTAA 64448 || | || | || ||||| || | ||||| ||||| |||| ||| ||||| Sbjct 187 GTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACATCTTTAA 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499486218986040