Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq19711 129 4e-25 seq20137 123 2e-23 seq20138 84.2 2e-11 >seq19711 Length=592 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| | ||| || ||||| || || |||||||| |||||||| |||||| Sbjct 366 CCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTG 307 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| ||||||| | || ||| |||||| | || | | |||||| ||| || Sbjct 306 AGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGG 247 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || || || || |||| || || || ||| ||| Sbjct 246 ATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACG 187 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || ||||| || ||||| || || || ||||| || || |||| ||| ||| Sbjct 186 TCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACATCTTT 136 >seq20137 Length=989 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GC 15007 |||||||| | |||||| || || || ||||| || || ||||| |||||||| || | Sbjct 165 GCCACCTCTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGA 224 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || |||| | ||||||| ||||| |||||| | || | | || ||| ||| | Sbjct 225 TAAGG-TTCTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGG 283 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||| ||||| |||| ||| || ||| | || || || || || | Sbjct 284 GAATTCCTTCTTTGTCCTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAA 343 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | |||||||| ||||||||||| || || || || ||||| ||||||||| Sbjct 344 CATCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCATA 393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| | ||| || || || |||||||| || ||||| || || |||||||| Sbjct 622 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 681 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| |||||||||||| || ||||| | || | | || ||| || ||| Sbjct 682 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 741 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || ||||| || ||||| Sbjct 742 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 801 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || | ||||| || || || || || |||||||| || |||| ||| ||| Sbjct 802 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTTT 852 >seq20138 Length=732 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| | ||| || || || |||||||| || ||||| || || |||||||| Sbjct 365 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 424 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || |||| |||||||||||| || ||||| | || | | || ||| || ||| Sbjct 425 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 484 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| || ||| || || | || ||||| || ||||| Sbjct 485 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 544 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || | ||||| || || || || || |||||||| || |||| ||| ||| Sbjct 545 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTTT 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357281404040435