Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq23162 168 8e-37 seq23963 91.5 2e-13 >seq23162 Length=1931 Score = 168 bits (186), Expect = 8e-37 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 7781 GCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCT 7840 |||||||||||||| | |||||||||||| |||||||| || || || || || |||||| Sbjct 1714 GCGTATTGGAAGATTAAACGACCAAAGTAACCGTGAGCTGCTACAATATTATAAGTCTCT 1655 Query 7841 TCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACC 7900 |||||||| ||||| ||||| || || || ||||| ||||| |||| Sbjct 1654 TCTTCTTGGCCGAAACGGTAACCCGCATTAGCAGATTCGTTTTCAGTTGTTTCGCGAATT 1595 Query 7901 AGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGACACCA 7960 | ||| || || || |||||||||||||| || ||||| ||||| ||||| ||||| Sbjct 1594 AAAGATGAAGTAACTAGCGAACCATGCATTGCTGAAAACAGCGAACCGCCAAATACACCT 1535 Query 7961 GCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAA 8018 || || || | ||||||||| || ||||| || || || ||||| || ||||| |||| Sbjct 1534 GCAACACCTAACATGTGGAACGGATGCATAAGAATATTATGCTCGGCCTGGAATACAA 1477 >seq23963 Length=704 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 7531 AGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCC 7590 ||| | ||| | || || |||||||| || || ||||| |||||||| |||||||| || Sbjct 564 AGCTGAAGCTAAATCTAGTGGGAAGTTATGTGCGTTACGTTCGTGCATTACTTCCATACC 505 Query 7591 AAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAAT 7650 | ||||||||||| | ||| ||||| || || | ||||| |||||| ||| | Sbjct 504 TAAGTTAGCACGGTTGATAATGTCAGCCCATGTATTTAATACACGGCCTTGAGAATCTAC 445 Query 7651 GATGGACTGGTTGAAGTTGA 7670 | || ||||||||||||| Sbjct 444 AACTGATTGGTTGAAGTTGA 425 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 7670 AAACCGTTGAGGTTGAATGCCATGGT-GCTAACACCAAGAGCAGTGAACCAGATGCCAAC 7728 || ||||| |||||||| ||||| || | ||| ||| | ||| || |||||||| | || Sbjct 152 AACCCGTTAAGGTTGAAAGCCATTGTTGATAA-ACCTAAAGCTGTAAACCAGATACATAC 94 Query 7729 AACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAA 7776 ||||||||| || || | ||||||||| | |||||| ||||||||| Sbjct 93 AACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGGCTGTTGTTGAA 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621927345365040