Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq5918 89.7 4e-13 >seq5918 Length=2920 Score = 89.7 bits (98), Expect = 4e-13 Identities = 164/239 (69%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 39481 ATCCAATCATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATA 39540 |||| || | |||| |||| | | || |||||||| | |||| ||| ||||| ||| Sbjct 2581 ATCCCAT-ACCGCCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATA 2639 Query 39541 TTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGC 39600 || || || | ||| | | |||| ||||||| || || |||| || | | ||| Sbjct 2640 TTGTAGTCAGACAAGGTTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGT 2699 Query 39601 TGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCT 39660 ||||| | ||| | ||||||||||| || || || | || ||| ||||| Sbjct 2700 TGATCAGGGGGGATTCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCA 2759 Query 39661 GCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | | ||| ||||| | |||||| || || ||||| ||||| || ||||| |||| ||| Sbjct 2760 GAGGGTTCAACGTCTAGAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACAT 2818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347262105500303