Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq19711 136 4e-27 seq20137 102 8e-17 seq5918 87.8 2e-12 >seq19711 Length=592 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||| |||| ||||| ||||| || || |||||||| |||||| | ||||| || | Sbjct 136 AAAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACC 195 Query 38300 CACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | | |||| | | | ||||| | || | || |||| ||||| || || || || ||| Sbjct 196 CTCAGACACCATTGAAAACG-TGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCG 254 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 | |||||| | ||||| | ||| || ||| | || || |||| | || |||| ||||| Sbjct 255 ATCAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACT 314 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| ||| | || || || ||||| || | |||||||| || Sbjct 315 ACAACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGG 366 >seq20137 Length=989 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || |||||||||||| | || || ||| || | Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||| | || || |||||||| ||||||||| |||| ||| Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGATCAA 273 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || | || || | ||| || |||||||| || || | | ||| | ||||||||| Sbjct 272 TAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAAC 213 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 || |||||||| | || || || ||||| Sbjct 212 ATTCAAAAGGAGTCAACCCTCCACTTGGT 184 >seq5918 Length=2920 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||| | |||||||| || || | |||||||| || || || | ||||| || || Sbjct 2821 AAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACCC 2762 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || || | |||||||| ||||| ||| | || Sbjct 2761 TCTGACACCATAGAGAACG-TGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGA 2703 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||| | || || | || || || | |||| || | | ||| | ||||| Sbjct 2702 TCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTA 2643 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| |||||||||||| | || || |||||||| || | | ||||| ||| Sbjct 2642 CAATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAGACTCAGAGGTGGC 2591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500014051405440