Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq10356 174 2e-38 seq16451 145 9e-30 seq6480 138 1e-27 seq5752 105 8e-18 >seq10356 Length=2916 Score = 174 bits (192), Expect = 2e-38 Identities = 469/707 (66%), Gaps = 13/707 (2%) Strand=Plus/Plus Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATC 112001 || ||||| | ||| ||||||||||| || ||| ||| | | || ||| | | Sbjct 1101 GTGTTTAATGACACTGCGCGCTATGTCGACTAAGGTGGCGGGAAAAGAAAAGGAGCCTTT 1160 Query 112002 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 112061 || || ||| ||||||||||||| ||||| ||| || ||| | ||||| | ||| Sbjct 1161 GCTGTTTATGTTGAGCCATGGCATGCGGACATCTACGACTTCTTATAGTTGAGGAAGAAC 1220 Query 112062 CAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 112120 || ||| | |||||| | | || || ||| | |||| || |||||||| |||||||| Sbjct 1221 CATGGTAAGGAGGAGAA-CAGAGCTCGTGATTTGTTCTATGCCCTCTGGATCCCAGATCT 1279 Query 112121 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACC 112180 ||||||| ||||| || ||| || | ||| |||| | || || | || || Sbjct 1280 TTTCATGAGAAGAGTAGAAAAGAATGAACACTGGACTCTAATGTGCCCTAATGAGTGCCC 1339 Query 112181 CGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAG-TACGAGGAAG 112239 || | ||| || ||| ||||| ||||| |||||| ||||| || || ||| Sbjct 1340 AGGATTGAGTGATACCTGGGGAGAGGAATTTGACAAGCTCTAC-CAAAGCTATGAAGAAC 1398 Query 112240 AAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG--TGTGGAAAGCTATTCTCAAGTC 112297 || || | | | ||| | ||| |||| | ||| || ||| | |||| Sbjct 1399 AAGGTAGAGGCAGAAAGACCATATAAGCAA--GATGGCTATGGTAATAGATTATAGAGTC 1456 Query 112298 TCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAA 112357 ||| |||||||||||||| |||||||||||||| || | || || |||| ||| Sbjct 1457 ACAACTAGAGACTGGTACACCCTATATGCTTTACAAGGATACGTGCAATAGAAAGTCTAA 1516 Query 112358 TCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTAC 112417 | | |||||||| || || ||||| || | ||||| ||||| | |||| ||| Sbjct 1517 CTAGCAAAATTTGGGAACAATAAAAAGTTCAAATTTGTGTACTGAAATTGTTGAATATAC 1576 Query 112418 AGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 112477 | ||||| |||||| |||||| | || ||| | || || || | |||||| | Sbjct 1577 ATCTCCTGATGAAGTGGCTGTTTGTAACTTGGCTTCAGTAGCACTACCAAGGTATGTAAA 1636 Query 112478 TCCAGAGACAA-AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAA 112536 |||||||| ||| ||||||||||| ||| || ||| || || | | || | Sbjct 1637 GAAAGAGACAAGAGA-GTTTGATTATGATTTACTTCATTCAGTAACAAAGAGAATAACTA 1695 Query 112537 AAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTA 112596 |||| || || | || |||||| | || | || || || || ||| | |||| Sbjct 1696 AAAATCTGAATAAGGTGATTGATGGGAACTACTATCCAGTCAAGGAGGCTGAATATTCTA 1755 Query 112597 ATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGAT 112643 ||| |||||| | || ||||| || ||||| |||| |||| ||| Sbjct 1756 ATAAGAGACATAGACCCATTGGACTTGGTGTTTAAGGATTCGCTGAT 1802 >seq16451 Length=2876 Score = 145 bits (160), Expect = 9e-30 Identities = 616/954 (65%), Gaps = 23/954 (2%) Strand=Plus/Minus Query 111704 GTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAG 111763 ||||| || || || || || || |||||||| ||||| |||| ||| | ||| Sbjct 2029 GTTCACTCATGCTACTCCTACACTTTTCAACGCAGGTACCCCAAAACCTTAGATGAGTTC 1970 Query 111764 TTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGA 111823 ||||||||| | | | || || ||||| | | || || | | || |||| | Sbjct 1969 TTGTTTCCTATTAACTATGAAAGAAGATTCTGTAGAAGGTATCTTTGAAACACTCAAGTA 1910 Query 111824 ATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGC 111883 | ||| ||||| ||| || ||||| || || | || ||| | ||||| Sbjct 1909 AATTGCTGTTATCTCCAAGGCCGCAGGTGGCATTGGAGTATCAGTCTCAGATATAAGAGC 1850 Query 111884 CAACA-AGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | || | ||| ||||||||| || || ||| | || | || || |||| |||||| Sbjct 1849 -AGCAGATTCTTATATTAGAGGAACTAACGGTTATGCAAACGGACTTGTTCCTATGCTTA 1791 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTA 111999 || ||||| | ||| || | ||||| | |||| || | | || ||| | Sbjct 1790 AAGTTTTTAATGACACTGCTAGGTATGTTGATCAAGGAGGTGGAAAGAGAAAAGGAGCAT 1731 Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059 | || |||||| | || || ||||| || ||||| || |||||| | | | | Sbjct 1730 TTGCTGTCTATGTAGAACCTTGGCATGCTGATATTTATGACTTCCTTTAACTTAGAAAGA 1671 Query 112060 ACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 112119 | || || | || || | | | ||||| |||| || |||||||| ||||||| Sbjct 1670 ATCATGGCAAAGAAGAAAATAGAGCCAGAGATCTATTCTATGCACTCTGGATCCCAGATC 1611 Query 112120 TCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCAC 112179 | || ||||| ||||| || ||| || | ||| |||| | ||||| | || | Sbjct 1610 TTTTTATGAAAAGAGTCGAAAAGAATGAAGAATGGACTCTAATGTGTCCTAATGAGTGCC 1551 Query 112180 CCGGTCT--CTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGA 112237 | ||| | || | |||| | ||| || || || || || || ||| || || || Sbjct 1550 CAGGTTTGACTAC-ATGCTG-GGGAGAAGAATTCGAGAAACTTTATGAAAAATATGAAGA 1493 Query 112238 AGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG--TGTGGAAAGCTA--TTCTCA 112293 ||| | | | | ||| | ||| |||| | |||| |||| || | Sbjct 1492 AGAGGGAAGAGGCAGAAAGACTATAAAGGCTA--GATGGTTATGGA--GCTAGATTGTAG 1437 Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 | ||||||| |||||||| || ||||||||||| |||||||| | |||||| ||| Sbjct 1436 AATCTCAAATTGAGACTGGAACTCCATATATGCTATACAAAGATACTTGTAACAGAAAAT 1377 Query 112354 GTAATCAAAAGAATTTGGGTGTG-ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAA 112412 |||| || | || |||| ||| || || ||||| || |||||||| ||||| | ||| Sbjct 1376 CTAATTAACAAAACCTGGG-GTGCATAAAAAGTTCAAATCTCTGTACTGAAATTGTAGAA 1318 Query 112413 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 112472 | ||| | |||||| ||||| ||||| || || ||||| || | || || | Sbjct 1317 TATACTAGCCCAGATGAAGTAGCTGTATGTAATCTAGCCTCAATAGCCTTAAACAGGTTT 1258 Query 112473 GTGGATCCAGAGAC-AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 112531 || | |||| || ||||| || ||| ||||| || | || || ||||| |||| | Sbjct 1257 GTAAAAACAGAAACTAAAGA-ATATGACTATGAGAAGTTGCATGATGTTACCAAAAGAAT 1199 Query 112532 CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG-TTGAGACTGCTCGTA 112590 || || || |||||| | ||||||| |||| |||||| | || ||| || | Sbjct 1198 TACTAAGAATTTAAACAAGATAATTGATAATAATTATTACCCAGTTTCAGA-AGCAAGAT 1140 Query 112591 AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 | || ||| | | ||| | || |||||| | ||||| ||||| | || |||| Sbjct 1139 ATTCAAATCTTAAACATAGACCCATTGGTATTGGTGTTTAAGGTTTTGCAGATG 1086 >seq6480 Length=2904 Score = 138 bits (152), Expect = 1e-27 Identities = 564/871 (65%), Gaps = 31/871 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || || || ||| || |||| || | ||||||| ||| |||||||||||||||| Sbjct 780 CCTCAATAAATGCTCTTGCGTGTTTCAGTCGGTATTCATAAAGAAGATATTGATTCTGCA 839 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTAT---GTTCATCCACGCAACACCAACCCTC 111728 | || ||||| || ||| ||| || ||||| ||||| || || || || Sbjct 840 ATTGAAACATATAACCTTATGA---GTGATAGATGGTTCACTCACGCTACTCCTACTCTA 896 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 || || || || || || | ||| |||||| ||| |||||| | | | ||||| Sbjct 897 TTTAATGCCGGAACTCCTAAACCTCAAATGAGCAGCTGTTTCTTGCTCATGATGAAGGAT 956 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGT-GCCCAAATCTCAAAGTGGGC 111847 |||||||| | || || || | ||| | | |||| | || | ||||| ||| | || Sbjct 957 GATTCAATTATGGGTATATATGATACTTTGAA-GAATATCGCTCTTATCTCTAAGAGTGC 1015 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907 ||| || | || | | ||| | | ||||| | || || | || || Sbjct 1016 TGGAGGAGTTGGACTTGCTGTTCATAACATTAGAGCTACTGGATCCTACATCAAGGGAAC 1075 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 ||| ||||| || |||| || | || ||||| | || || || | || || || || Sbjct 1076 AAACGGTCATTCTAATGGCCTTGTACCCATGCTGAGAGTCTTCAATGAAACTGCCCGTTA 1135 Query 111968 TGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | |||| ||| || | || |||||| |||| ||||| | || |||||||| Sbjct 1136 TGTAGATCAAGGTGGTGGTAAGAGAAAAGGATCTTTCGCCATCTATTTAGAACCATGGCA 1195 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| || ||| | || ||||| || | ||| || || ||| | ||||| | | | Sbjct 1196 CGCTGACATCTTTGATTTCCTATAGCTCCGTAAAAATCACGGTAAAGAGGA-ACAAAGAG 1254 Query 112085 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 | | ||||| |||| ||| | ||| |||| |||||||| ||| | ||||| || | Sbjct 1255 CAAGAGATCTTTTCTTTGCTTTGTGGGTTCCTGATCTCTTTATGGAAAGAGTAAGAGATA 1314 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCC---GGTCTCTCCGATGCCGTGG 112200 ||| | ||| | | || || || ||| | | || ||| | | || | | | Sbjct 1315 ATGGAGACTGGACCTTATTCTGCCC---CAATGAAGCCAAGGGTTTATTTGAGGTCCACG 1371 Query 112201 GTGAGGAGTT--TGAAGCCCTCTACACAAAGTACGAGGAAGAAAG--TCGGGCGACTGCG 112256 | || ||||| | ||| || ||||| | ||||| |||| | |||| || Sbjct 1372 GAGAAGAGTTCGTTAAG--CTATACACTAGATACGAACAAGAGGGTATCGGCAGA--AAA 1427 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATT-CTCAAGTCTCAAACCGAGACTGGTAC 112315 || | |||| | | ||| |||||||| | || || ||| || ||||| || Sbjct 1428 ACTATTAAAGCTCAAAAACTTTGGGAAGCTATTATTGAAAGCT-AAATTGAAACTGGAAC 1486 Query 112316 ACCATATATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 ||||| |||||||||||||| | || ||| || |||||| |||||||| | || Sbjct 1487 TCCATACATGCTTTACAAAGA-TCATGCCAACAGTAAAAGTAATTAAAAGAATCTTGGAA 1545 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 |||||||| || ||||| ||| || ||| | |||| ||| | ||||||| | Sbjct 1546 CCATCAAGAGCTCTAACCTTTGTTGTGAGATCATTGAATATACTTCCCCAGATGAGGTAG 1605 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCC 112465 |||| || || | ||||||||| | || || Sbjct 1606 CTGTATGCAATTTAGCATCAATCTCACTTCC 1636 >seq5752 Length=1520 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 || |||||| ||||| | || || || | |||| || || ||||| || || || || Sbjct 673 CTATGCTGAAAGACTCGTTGCTTTCGCTGCTATTGAAGGAATTTTCTTTTCAGGGTCTTT 614 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 |||| | || | ||||| || ||||| |||||||||||||| ||| ||||| || || Sbjct 613 CTGCTCAATCTTCTGGCTAAAAAAGCGTGGTCTCATGCCAGGCCTCACTTTCTCAAATGA 554 Query 102293 GCTTATCTCTCGTGACGAGGG 102313 ||||||||||||||| ||||| Sbjct 553 GCTTATCTCTCGTGATGAGGG 533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620545384121520