Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq10356 102 1e-16 seq6480 98.7 1e-15 seq11166 89.7 6e-13 seq11164 84.2 3e-11 >seq10356 Length=2916 Score = 102 bits (112), Expect = 1e-16 Identities = 847/1358 (62%), Gaps = 32/1358 (2%) Strand=Plus/Minus Query 109695 ATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754 ||| | |||||| || ||| || |||||||||||||||||| | || ||| Sbjct 2207 ATCATTAACAAGGTGAGGGTTAACACAGACAAATTCACCAGCAAGAACTCTTCTTGTGTA 2148 Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814 || |||| || || |||||||| ||||||||| || |||||||| | ||| || || Sbjct 2147 GACATTAGAGGTATAAGGTTCGAATGCCTCATTGTTTCCAAGGATTTGAGAAGTTGAGGC 2088 Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG 109874 ||| ||||| ||||| | | ||| |||| ||| | || | || || | Sbjct 2087 TGTTGGCATAGGAGCAACCAAGAGAGAATTTCTTGCACCATATTTCATAACATCCTACCT 2028 Query 109875 CATTGCGTCCCAATCATAACGACCA---CTAAATTTAGTCTCACCATCCCACATATCTGG 109931 | | |||||||||||| ||| || | | ||| | |||||||| || Sbjct 2027 AAGTTTGTCCCAATCATAGCGATCAGAGCAAGGTTTTTT------ATCCCACAAGTCAAA 1974 Query 109932 TTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTC 109991 || | | || | || |||||| || |||| |||| || | ||||||||| Sbjct 1973 TTAGAATTTGCCTTGAGATAGAGGAGAGCCTGGGAAAGTCTCATAATAGCCCTCAACCAT 1914 Query 109992 GGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATT 110051 |||||| || ||| || || | || |||||||| | ||| || ||||| | | | Sbjct 1913 GGCCAATTCCATTGATGCTTCCATCGCTGCATGATAGAGAGTTTC--GAATATCA--ACT 1858 Query 110052 CA-TGAGGC---GAGACTCTTCACAGTC-GAAGGGAAGACCACAAAGAATAAACACATCC 110106 || | || | ||| || | | || ||| || || | | || ||| Sbjct 1857 CATTTAGTCTCTGAGCTTCCTGGCTTTCATAAGTTAACTTCATCATTTGT-AAGGTATCA 1799 Query 110107 GCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTT 110166 || | || | |||||| || |||||||| | ||| || | ||||| | ||| Sbjct 1798 GCGAATCCTTAAACACCAAGTCCAATGGGTCTATGTCTCTTATTAGAATATTCAGCCTCC 1739 Query 110167 TCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTG 110226 | || || || |||| | || || ||| ||| ||||| || || | |||| || Sbjct 1738 TTGACTGGATAGTAGTTCCCATCAATCACCTTATTCAGATTTTTAGTTATTCTCTTTGTT 1679 Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGA 110286 | | ||| ||| || ||||| ||| | | ||||| || || ||||| | || || Sbjct 1678 ACTGAATGAAGTAAATCATAATCAAACTCTCTTGTCTCTTTCTTTACATACCTTGGTAGT 1619 Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346 || | || || | || || |||| || || || ||||| | |||||| Sbjct 1618 GCTACTGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGATGTATATTCAACAATTTCA 1559 Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406 |||||||| || ||||| || || ||||| || | || || || || ||||| Sbjct 1558 GTACACAAATTTGAACTTTTTATTGTTCCCAAATTTTGCTAGTTAGACTTTCTATTGCAC 1499 Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466 | |||||| || ||||| || || |||||||| || ||||||| | ||| | | Sbjct 1498 GTATCCTTGTAAAGCATATAGGGTGTACCAGTCTCTAGTTGTGACTCTATAATCTATTAC 1439 Query 110467 CATA--CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTA-CTTGGTG 110523 |||| |||| || | || | | ||||| || || || ||| | | Sbjct 1438 CATAGCCATC--TTGCTTATATGGTCTTTCTGCCTCTACCTTGTTCTTCATAGCTTTG-G 1382 Query 110524 TACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTGTCGGGACA 110582 || | | |||||||||| ||| | |||| | | ||| || || | || || Sbjct 1381 TAGAGCTTGTCAAATTCCTCTCCCCAGGTATCACTCA-ATCCTGGGCACTCATTAGGGCA 1323 Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 | || | ||| | | || || || || || ||||||| || || || ||||| | Sbjct 1322 CATTAGAGTCCAGTGTTCATTCTTTTCTACTCTTCTCATGAAAAGATCTGGGATCCAGAG 1263 Query 110643 CGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAA 110702 || |||| | ||||| | ||| || | ||| ||||| | | || || Sbjct 1262 GGCATAGAACAAATCACGAGCTCTGTTCTCCTCCTTACCATGGTTCTTCCTCAACTATAA 1203 Query 110703 AAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG 110762 ||||| ||| |||| |||||||| || | ||| ||||| | || ||| || | Sbjct 1202 GAAGTCGTAGATGTCCGCATGCCATGGCTCAACATAAACAGCAAAGGCTCCTTTTC-TTT 1144 Query 110763 ACCCGCC----TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 |||||| | || |||||||| || ||| |||| || || | || | ||||| | Sbjct 1143 TCCCGCCACCTTAGTCGACATAGCGCGCAGTGTCATTAAACACTTTCAGAAGAGGAACTA 1084 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGA 110878 ||| || | ||| ||||| || ||||| ||| | | | ||||| |||| | Sbjct 1083 GTCCTGTGGCATAACCGTTTGTGCCTCTAATATAGGAGTCAGTCGCACGTATGTTACTAA 1024 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCAT 110938 | |||||||||||| || || ||| ||| | | | ||||| || Sbjct 1023 CTGATACACCAATACCACCAGCGGCTTTCGAAATAACCGCAATTTATTTCAGTGTTTCAA 964 Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998 | || || |||| |||||| | || | | || ||| ||||||||| ||| | || Sbjct 963 ATATGCCTTCAACTGAATCTTCTTTAGTCGTAAGTAGGAAGCAAGAACTCATTTATGGTT 904 Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 || || || | ||||||||| || || || |||||| Sbjct 903 TTGGTGTACCAGAATTGAAGAGAGTGGGAGTAGCATGA 866 >seq6480 Length=2904 Score = 98.7 bits (108), Expect = 1e-15 Identities = 411/644 (64%), Gaps = 11/644 (2%) Strand=Plus/Minus Query 110498 CGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAG 110557 ||| ||| || | ||||| | ||||| | | | || || | ||||| || ||| Sbjct 1419 CGATACCCTCTTGTTCGTATCTAGTGTATAGCTTAACGAACTCTTCTCCGTGGACCTCAA 1360 Query 110558 AAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCT 110617 | | |||||| || | | ||| ||||| | || ||| | |||| || || || | Sbjct 1359 ATAAACCCTTGGCTTCATTGGGGCAGAATAAGGTCCAGTCTCCATTATCTCTTACTCTTT 1300 Query 110618 TCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCAT 110677 ||| || || ||||||| ||||| || ||||||| || | | || || | Sbjct 1299 CCATAAAGAGATCAGGAACCCACAAAGCAAAGAAAAGATCTCTTGCTCTTTGTTCCTCTT 1240 Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737 ||| || || || |||| | || || | ||| || | |||||||||||| | || Sbjct 1239 TACCGTGATTTTTACGGAGCTATAGGAAATCAAAGATGTCAGCGTGCCATGGTTCTAAAT 1180 Query 110738 AGACAGCGATGGATCCCTTAC---GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCAT 110794 ||| |||| ||||| || | || ||| | || | ||||| || || || ||| Sbjct 1179 AGATGGCGAAAGATCCTTTTCTCTTACCACCACCTTGATCTACATAACGGGCAGTTTCAT 1120 Query 110795 TGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGG 110854 ||||||| || ||||| || | || |||| || ||||| ||||| ||| | || || Sbjct 1119 TGAAGACTCTCAGCATGGGTACAAGGCCATTAGAATGACCGTTTGTTCCCTTGATGTAGG 1060 Query 110855 ACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTT 110914 | | | || | ||||| || | | | |||| || || || | |||| || Sbjct 1059 ATCCAGTAGCTCTAATGTTATGAACAGCAAGTCCAACTCCTCCAGCACTCTTAGAGATAA 1000 Query 110915 GTGC-ACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATT 110973 | || | | ||| | | ||| |||| ||||| ||| ||||| |||| | || Sbjct 999 GAGCGATATTCT-TCAAAGTATCATATATACCCATAATTGAATCATCCTTCAT---CATG 944 Query 110974 AGAAAGCAAGA---AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTC 111030 || ||| || | ||| ||||| ||| ||||| ||||| || || ||||| || Sbjct 943 AGCAAGAAACAGCTGCTCATTTGAGGTTTAGGAGTTCCGGCATTAAATAGAGTAGGAGTA 884 Query 111031 GCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT 111090 || ||| ||||| | | ||| ||| ||||| || | ||| || | |||| Sbjct 883 GCGTGAGTGAACCATCTATCACTCATAAGGTTATATGTTTCAATTGCAGAATCAATATCT 824 Query 111091 TTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG 111134 | |||||||| | | ||| |||| || ||| |||||||| Sbjct 823 TCTTTATGAATACCGACTGAAACACGCAAGAGCATTTATTGAGG 780 >seq11166 Length=3740 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 11671 TTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 |||||| | ||||| || || ||||| ||||| | ||| | ||| || |||| || Sbjct 2412 TTCTTAGCTACAGCATCGATTTCATCTATGAAGATGATTGATGGTGCCTTCTCACGAGCT 2353 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTC--GCTCCAACACCTACGAACATCTCAACGAAGT 11788 | | |||||| || | ||| ||| || || || || ||||||||||||||||||| Sbjct 2352 TTCTTGAAAAGGTCTCT--CACTCTTGAGGCACCGACTCCCACGAACATCTCAACGAAGT 2295 Query 11789 TTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847 || ||| | | ||| | ||||||||| | ||||||||| | || ||| || Sbjct 2294 CTGATCCAG-AGATTGATAAGAAGGGAACTCCTGCCTCACCAGCAACAGCCTTAGCTAGA 2236 Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||||||||||| || || |||| ||| | | | ||| || | ||||| | ||||| Sbjct 2235 AGAGTCTTACCAGTGCCTGGTGGTCCAACCAATAAGGCACCTCTTGGGATTTAAGCACC 2177 >seq11164 Length=3644 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 11670 CTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATA-CACGGTTGGTTGGCACGTG 11728 ||||||||| ||||| || |||||||| || || | || || || || || | || Sbjct 2413 CTTCTTACCAACAGCATCGATCTCATCAATAAAGATAATGGCAGGGGCTCTTTGC-CTTG 2355 Query 11729 CCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 ||| || ||| || || | ||| | || || || || ||||||||||||||||||| Sbjct 2354 CCTTTTTGAAGAGGTCTCTTACTCTTGAGGCACCCACTCCAACGAACATCTCAACGAAGT 2295 Query 11789 TTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847 || ||| | | ||| | ||||||||| || ||||| || | || ||| || Sbjct 2294 CTGAACCAG-AGATTGATAAGAAGGGAACCCCAGCTTCACCTGCAACAGCCTTAGCCAGA 2236 Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||||||||||| || || |||| ||| | | | ||| || | ||||| | ||||| Sbjct 2235 AGAGTCTTACCAGTGCCTGGTGGTCCAACCAATAAGGCACCTCTTGGGATTTAAGCACC 2177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588789066379800