Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq10356 185 1e-41 seq6480 131 2e-25 seq5752 89.7 6e-13 >seq10356 Length=2916 Score = 185 bits (204), Expect = 1e-41 Identities = 678/1051 (65%), Gaps = 17/1051 (2%) Strand=Plus/Minus Query 106279 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 106338 ||| |||| |||| |||||| | ||||| ||||| |||| | ||||||| | | || Sbjct 1802 ATCAGCGAATCCTTAAACACCAAGTCCAATGGGTCTATGTCTCTTATTAGAATATTCAGC 1743 Query 106339 AGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTT 106398 || || ||||| | || | ||||| || || |||||||| || | |||| Sbjct 1742 CTCCTTGACTGGATAGTAGTTCCCATCAATCACCTTATTCAGATTTTTAGTTATTCTCTT 1683 Query 106399 TGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGG 106458 ||| | | ||||||| ||||||||||| | ||||||| || |||||| |||| Sbjct 1682 TGTTACTGAATGAAGTAAATCATAATCAAACTCTCTTGTCTCTTTCTTTACATACCTTGG 1623 Query 106459 AAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAAT 106518 || || | ||| ||||| || ||||||||| ||||| | ||| || || | ||| Sbjct 1622 TAGTGCTACTGAAGCCAAGTTACAAACAGCCACTTCATCAGGAGATGTATATTCAACAAT 1563 Query 106519 TTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT 106578 ||| |||||||| || ||||| || || || |||||||| | | |||| |||| | || Sbjct 1562 TTCAGTACACAAATTTGAACTTTTTATTGTTCCCAAATTTTGCTAGTTAGACTTTCTATT 1503 Query 106579 GCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGC 106638 ||||| ||||||||| ||||| ||||| || || ||||| ||||||| | ||| Sbjct 1502 GCACGTATCCTTGTAAAGCATATAGGGTGTACCAGTCTCTAGTTGTGACTCTATAAT--- 1446 Query 106639 CTTCCACACATCGGCGGC-TGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTA-C 106693 || || ||| | | | || | |||| | || | | || | | || || | Sbjct 1445 CTATTAC-CATAGCCATCTTGCTTATATGGTCTTTCTGCCTCTACCTTGTTCTTCATAGC 1387 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 |||| |||||| ||||| ||||| ||| | || | ||||| || | Sbjct 1386 TTTG-GTAGAGCTTGTCAAATTCCTCTCCCCAGGTATCACTCAATCCTGGGCACTCATTA 1328 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || || | |||| ||| || || || || || | |||||||||| ||||| ||| Sbjct 1327 GGGCACATTAGAGTCCAGTGTTCATTCTTTTCTACTCTTCTCATGAAAAGATCTGGGATC 1268 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 || |||| | || | ||| | | | ||| || | ||| ||||| | ||| Sbjct 1267 CAGAGGGCATAGAACAAATCACGAGCTCTGTTCTCCTCCTTACCATGGTTCTTCCTCAAC 1208 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933 | | ||| || ||| ||||| ||||||||||||| ||| || || | | ||| ||| Sbjct 1207 TATAAGAAGTCGTAGATGTCCGCATGCCATGGCTCAACATAAACAGCAAAGGCTCCTTTT 1148 Query 106934 C---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990 | | ||| ||| | ||||||||||| ||| | ||||| || || | ||| Sbjct 1147 CTTTTCCCGCCACCTTAGTCGACATAGCGCGCAGTGTCATTAAACACTTTCAGAAGAGGA 1088 Query 106991 ATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCA 107050 | | || | | ||| ||||| || | |||| || | | | || | | | | Sbjct 1087 ACTAGTCCTGTGGCATAACCGTTTGTGCCTCTAATATAGGAGTCAGTCGCACGTATGTTA 1028 Query 107051 -TGGATG-TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108 | || | || |||||||| ||||| || || || |||| | | || | Sbjct 1027 CTAACTGATACA--CCAATACCACCAGCGGCTTTCGAAATAACCGCAATTTATTTCAGTG 970 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 || || | || || | | ||| || || || | | | ||||||||| ||| | Sbjct 969 TTTCAAATATGCCTTCAACTGAATCTTCTTTAGTCGTAAGTAGGAAGCAAGAACTCATTT 910 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGG 107228 ||| |||||||||||| ||||||||| || || || || ||| | || | | | Sbjct 909 ATGGTTTTGGTGTACCAGAATTGAAGAGAGTGGGAGTAGCATGAGTAAAGAAGAGGTTGC 850 Query 107229 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCA 107288 ||| || || ||||| ||| | || || | ||||||| || || || ||| | Sbjct 849 TCATAAGATCATAGGTCTCAAAGGCTGACTCCAAGTCTTCCTTATGAATACCAATGCTTA 790 Query 107289 CACGCATAAACATGTATTGGGGTGTTTCCAT 107319 | | ||||| ||| | ||| ||| | || || Sbjct 789 CCCTCATAAGCATATGTTGAGGTCTCTCAAT 759 >seq6480 Length=2904 Score = 131 bits (144), Expect = 2e-25 Identities = 668/1051 (64%), Gaps = 37/1051 (4%) Strand=Plus/Minus Query 106278 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 106337 |||| || | ||||| || ||| | ||| ||||||||||||| ||| ||||| || || | Sbjct 1809 CATCAGCTAAACCTTAAATACCAATACCGATAGGTCTGTGTCTCATGTTAGAGTTGCGGG 1750 Query 106338 CAG--TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 106395 | || ||| ||||| || || |||| |||| || |||| ||| |||| Sbjct 1749 CTTCATCGCAA--GGATAGAAGTTGTTGTCTATGATTCTATTTAAATTACGAGTAATTTG 1692 Query 106396 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT-GACAT--A 106452 | | | | || |||||| || ||||||||||| | || |||| || || | Sbjct 1691 CATGGCTACTTAATGAAGCTTATCATAATCAAAGG---------CTCCATTTGAAATGAA 1641 Query 106453 CTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTC 106512 ||||| | ||||||||| |||||||| ||||| |||||| || || || Sbjct 1640 GCGAGGAAGTGAGATTGATGCTAAATTGCATACAGCTACCTCATCTGGGGAAGTATATTC 1581 Query 106513 TAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTT 106572 | || || ||| | ||| || ||||| || || || | |||||||| ||||| || Sbjct 1580 AATGATCTCACAACAAAGGTTAGAGCTCTTGATGGTTCCAAGATTCTTTTAATTACTTTT 1521 Query 106573 TTTGTTG-CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGA 106631 ||||| || | ||| ||||| |||||||| || || || || || | | | | Sbjct 1520 ACTGTTGGCATG-ATCTTTGTAAAGCATGTATGGAGTTCCAGTTTCAATTTAGCTTTCAA 1462 Query 106632 GAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTG--GCCCGT-CCCTCCGCCT 106688 ||| || | ||| | | ||| ||| | || ||| | ||||| | Sbjct 1461 TAATAGCTTCCCAAAGTTTTTGAGCTTT---AATAGTTTTTCTGCCGATACCCTCTTGTT 1405 Query 106689 CGTACTTTGTGTAGAGGGCTTCA--AACTCCTCACCCACCGCGTCGGAGAGACC--TGG- 106743 |||| | ||||| || ||| | ||||| || || | || | | ||| ||| Sbjct 1404 CGTATCTAGTGTATAG--CTTAACGAACTCTTCTCCGTGGACCTCAAATAAACCCTTGGC 1347 Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803 | | ||| || ||||| | | ||| | ||| || || | | ||| || || Sbjct 1346 TTCATTG---GGGCAGAATAAGGTCCAGTCTCCATTATCTCTTACTCTTTCCATAAAGAG 1290 Query 106804 GTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTT 106863 || |||| ||||| | | || |||||||| | || || | ||| || || Sbjct 1289 ATCAGGAACCCACAAAGCAAAGAAAAGATCTCTTGCTCTTTGTTCCTCTTTACCGTGATT 1230 Query 106864 GAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGAT 106923 || | || ||||| || | ||| || ||||||||||| || | ||||| |||| Sbjct 1229 TTTACGGAGCTATAGGAAATCAAAGATGTCAGCGTGCCATGGTTCTAAATAGATGGCGAA 1170 Query 106924 AGATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCG 106980 |||||| |||| || ||| |||||| |||||| || || || | || || || | Sbjct 1169 AGATCCTTTTCTCTTACCACCACCTTGATCTACATAACGGGCAGTTTCATTGAAGACTCT 1110 Query 106981 AAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGC 107040 ||||| || | || |||| || ||||| ||||| ||| || ||| | | || Sbjct 1109 CAGCATGGGTACAAGGCCATTAGAATGACCGTTTGTTCCCTTGATGTAGGATCCAGTAGC 1050 Query 107041 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 107100 ||| | | ||| | | |||| || ||||| | ||| ||||| | || | Sbjct 1049 TCTAATGTTATGAACAGCAAGTCCAACTCCTCCAGCACTCTTAGAGATAAGAGCGATATT 990 Query 107101 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 107160 | | | ||| |||| ||||| | ||||| || ||||| | || | ||| || || Sbjct 989 CTTCAAAGTATCATATATACCCATAATTGAATCATCCTTCATCATGAGCAAGAAACAGCT 930 Query 107161 GGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220 | ||| || ||| | || || || ||||| || || || || || |||||| ||||| Sbjct 929 GCTCATTTGAGGTTTAGGAGTTCCGGCATTAAATAGAGTAGGAGTAGCGTGAGTGAACCA 870 Query 107221 ACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCC 107280 | | ||| || ||||| || | |||||||||| ||||| || || || Sbjct 869 TCTATCACTCATAAGGTTATATGTTTCAATTGCAGAATCAATATCTTCTTTATGAATACC 810 Query 107281 GATGGCCACACGCATAAACATGTATTGGGGT 107311 || | ||||||| | ||| ||||| ||| Sbjct 809 GACTGAAACACGCAAGAGCATTTATTGAGGT 779 >seq5752 Length=1520 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||| || || ||||| ||||||||||| ||||||||||||||||| ||||| Sbjct 533 CCCTCATCACGAGAGATAAGCTCATTTGAGAAAGTGAGGCCTGGCATGAGACCACGCTTT 592 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398 || | ||| | || | |||||| ||||| || ||||| || || || Sbjct 593 TTTAGCCAGAAGATTGAGCAGAAAGACCCTGAAAAGAAAATTCCTTC 639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589793547468840