Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq23162 183 4e-41 seq7281 150 2e-31 seq23963 95.1 1e-14 >seq23162 Length=1931 Score = 183 bits (202), Expect = 4e-41 Identities = 182/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 169906 GTTTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGA 169965 || ||||| || |||||||| ||||| |||||||| ||||||||| ||| || ||||| Sbjct 1479 GTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAGGT 1538 Query 169966 ATGTTCGGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATC 170025 | || || || || | || ||||||||||||||||| || |||||||||||| |||| Sbjct 1539 GTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAATT 1598 Query 170026 AGAGAAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAA 170085 | |||||||| || | || || || ||||| ||||| ||||||||||| Sbjct 1599 CGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAGAG 1658 Query 170086 ACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGC 170141 || || || || |||||||| |||||||||||||||||| | |||||||| || || Sbjct 1659 ACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq7281 Length=3367 Score = 150 bits (166), Expect = 2e-31 Identities = 340/506 (67%), Gaps = 4/506 (1%) Strand=Plus/Minus Query 154613 TGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGC 154672 |||| |||| || |||||||| ||| | ||| | | ||||| ||||| || || | || Sbjct 1286 TGATGCTATCTCTTTACAACCAAACTCTGGAGCTAATGGTGAATATGCTGGTCTCATGGC 1227 Query 154673 AATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGA 154732 ||| | ||| ||| | | |||||| | ||| || | || | || |||| Sbjct 1226 CATCAAGAAATATCATGAGAGCAGAGGAGACTTCCACAGAGATATTTGCCTCATCCCAGT 1167 Query 154733 GTCAGCACATGGAACTAATCCTGCTAGTGCTG-TCATGGCAGGGATGAAAGTTGTAGGTG 154791 ||||| || ||||| || |||||| |||| || | ||| |||||| | || | || Sbjct 1166 CTCAGCTCACGGAACCAACCCTGCTTCAGCTGCTCTTTGCAAC-ATGAAAATCGTTGTTG 1108 Query 154792 TCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCT-AGAGAAGAAAGCAATCATG 154850 | | ||||||| |||| ||||| || | | ||||| ||| |||||||| || Sbjct 1107 TAGATTGTGATGCCAATGGCAACATTGATGTTGATGATCTCAGA-AAGAAAGCTGAAATT 1049 Query 154851 AATACATTTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAA 154910 | | | | | || ||||| |||||||||| ||||| || || ||||| || || ||| Sbjct 1048 CACAAAGATAAGCTATCATGCTTTATGATTACCTACCCCTCAACTCATGGAGTGTTCGAA 989 Query 154911 ACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGAT 154970 | || | | | || ||| | ||| | || | |||| ||||| | ||| | ||| Sbjct 988 TCAAAGGTCATTGAAATGTGTGATATCATCCACAATTATGGAGGTCAAATCTATATGGAT 929 Query 154971 GGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTA 155030 |||||||| | || || ||| | || || | ||| | ||| || ||||| Sbjct 928 GGAGCAAACTTCAACGCTCAGATGGGTCTCACTTCTCCAGGATTCATTGGAGCTGATGTT 869 Query 155031 TGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTA 155090 | ||||| ||| | || || || |||| ||||| || |||||||| |||||||| || Sbjct 868 GGACATCTTAACCTCCACAAGACCTTCTCAATTCCCCACGGAGGTGGTGGTCCTGGTGTT 809 Query 155091 GGTCCTATAGGTGTAGCAAAACATCT 155116 ||||| || ||||| |||||||| Sbjct 808 GGTCCCATTGGTGTGAAGAAACATCT 783 >seq23963 Length=704 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 170252 TCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGATG 170311 ||||||| |||||||||||||| ||| || | || | | ||||||| ||| Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 170312 TTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCC 170371 || | ||| | || ||||| ||||||||||| ||||| ||| | || ||||| ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 170372 CACTAGACCTAGCATCTGCT 170391 ||||||| |||| || ||| Sbjct 545 CACTAGATTTAGCTTCAGCT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579028965097440