Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq23162 159 4e-34 seq23963 100 3e-16 >seq23162 Length=1931 Score = 159 bits (176), Expect = 4e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 168367 GTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGG 168426 || ||||| || ||||| |||||||| |||||||| ||||| ||| | || ||||| || Sbjct 1479 GTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAGGT 1538 Query 168427 GTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 168486 |||||||| || ||||| || ||||| || | |||||||| ||| | || Sbjct 1539 GTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAATT 1598 Query 168487 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 168546 | || || ||||||| |||||| || |||||| ||||| ||||||||||| Sbjct 1599 CGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAGAG 1658 Query 168547 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGC 168602 || || || || ||||| ||||| |||||||| |||||||| |||||||||||||| Sbjct 1659 ACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 168713 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 168772 ||||||||||||| || | | ||| ||| || ||||| || || || ||||| || Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 168773 TTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 168832 || | ||||| ||| | ||||||||||| ||||| || ||||||||||| ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 168833 CACTCGATCTTGCTGCTGCT 168852 |||| ||| | ||| | ||| Sbjct 545 CACTAGATTTAGCTTCAGCT 564 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 168605 CATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCT 168664 ||||||||||| ||| || || ||||||||| | ||||| ||||| ||||| | |||| Sbjct 44 CATTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCT 103 Query 168665 GGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTT 168713 |||| || || | || | || || ||||| |||||||| ||||| || Sbjct 104 GGTTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574291269260280