Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq23162 178 1e-39 seq23963 105 8e-18 >seq23162 Length=1931 Score = 178 bits (196), Expect = 1e-39 Identities = 181/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 168995 GTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGT 169054 |||||||| || ||||| || |||||||||||||| ||||| ||| ||| || |||||| Sbjct 1479 GTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAGGT 1538 Query 169055 ATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATC 169114 | || || || || || || || |||||||||||||| || || || || ||| |||| Sbjct 1539 GTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAATT 1598 Query 169115 AGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAA 169174 | || || ||||| | |||||| || |||||| ||||| ||||||||||| Sbjct 1599 CGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAGAG 1658 Query 169175 ACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGC 169230 || ||||||||||| ||||| || || ||||| ||| | ||||||||||| || || Sbjct 1659 ACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 169343 AACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTA 169402 ||||| |||||||||||||||||| | | || | | |||||||| |||| | Sbjct 427 AACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACATT 486 Query 169403 CTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCA 169462 | ||| | || ||| | ||||||||||||||||| || |||||||| || ||||||||| Sbjct 487 ATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCCCA 546 Query 169463 CTAGACTTAGCATCTGCT 169480 ||||| ||||| || ||| Sbjct 547 CTAGATTTAGCTTCAGCT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564262453291680