Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq23162 178 1e-39 seq23963 95.1 1e-14 >seq23162 Length=1931 Score = 178 bits (196), Expect = 1e-39 Identities = 182/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 162887 TTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAG 162946 |||| ||||| || ||||| || ||||| |||||||| ||||||||||| ||||| |||| Sbjct 1477 TTGTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAG 1536 Query 162947 GTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCG 163006 |||| || || ||||| ||||| |||||||| ||||| | ||||| || || | Sbjct 1537 GTGTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAA 1596 Query 163007 TCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAG 163066 | || || || ||||||| || || || |||||| ||||| |||||||||| Sbjct 1597 TTCGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAG 1656 Query 163067 AGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 163124 |||| || || || || ||||| || |||||||| |||||||| ||||||||||| || Sbjct 1657 AGACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 163235 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACG 163294 ||||||||||||| || | | ||| ||| || ||||| || || || ||||| ||| Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 163295 TTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCC 163354 || | |||||||| || ||||||||||| |||||||| || || || || ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 163355 CACTTGA 163361 |||| || Sbjct 545 CACTAGA 551 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 163127 CATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCT 163186 ||||||||||| |||||| || ||||||||| | ||||| ||||| ||||| | |||| Sbjct 44 CATTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCT 103 Query 163187 GGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTT 163235 |||| || || | || | ||||| ||||| |||||||| ||||| || Sbjct 104 GGTTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557407029808200