Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5918 174 3e-38 seq19711 167 5e-36 seq20138 147 5e-30 seq20137 147 5e-30 seq16451 86.0 1e-11 >seq5918 Length=2920 Score = 174 bits (192), Expect = 3e-38 Identities = 175/225 (78%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 |||||||||||| || | || |||||||| || ||||| |||||||| || | |||| | Sbjct 2597 TCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-G 2655 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | | ||| ||||| ||||| |||| ||||| || || || || | Sbjct 2656 TTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGGATTC 2715 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||||||||||||||| || ||| |||||||| |||||||| || ||| || || | Sbjct 2716 CTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACGTCTA 2775 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | |||| |||||| || |||||||| || ||||| | | ||||| Sbjct 2776 GAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACATTT 2820 >seq19711 Length=592 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| || | ||| |||||||| || |||||||||||||| || | ||| || Sbjct 589 TCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGTGT 530 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||| || ||||||||||||| |||||| || || ||||| || Sbjct 529 TCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAATACC 470 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| | || || |||||| ||||||||||| || ||| || || || || Sbjct 469 TTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATCGAG 410 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || ||||| | || ||| Sbjct 409 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| | ||| | ||||||||| || |||||||| || ||||| ||| ||||| Sbjct 361 TCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTGAGAGT 302 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || |||||||| | || || |||||||| |||| ||||| || ||||| || || Sbjct 301 TCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGGATACC 242 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| || || ||| ||||| ||||||||||| || ||| || || | Sbjct 241 TTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACGTCCAA 182 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || || | ||||| ||||| | || ||| Sbjct 181 GGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACAT 140 >seq20138 Length=732 Score = 147 bits (162), Expect = 5e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| || | |||||| || || ||||| || ||||||||||| | || || Sbjct 370 TCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGATAGGGT 429 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | | ||| || || ||||| |||| | ||| || || || || || Sbjct 430 TCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGGATACC 489 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||| || || ||||||||||||||| ||||| || || || || || Sbjct 490 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACATCGAG 549 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| |||||||| || | ||||||||||| | || ||||| Sbjct 550 AGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTT 593 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||||||||| | ||| | ||| || || ||||| |||||||| ||||| || | ||| || Sbjct 142 TCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGT 201 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || || ||||| || ||||| || | || ||||| || || || || || Sbjct 202 TCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACC 261 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||| || || |||||| || ||||||||||| | || || ||||| Sbjct 262 TTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAG 321 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | |||||||| |||||||| || ||||| Sbjct 322 AGTGATAGTCTTTCCAGTCAAAGTCTTAACGAA 354 >seq20137 Length=989 Score = 147 bits (162), Expect = 5e-30 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||||||| || | |||||| || || ||||| || ||||||||||| | || || Sbjct 627 TCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGATAGGGT 686 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| | | ||| || || ||||| |||| | ||| || || || || || Sbjct 687 TCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGGATACC 746 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||| || || ||||||||||||||| ||||| || || || || || Sbjct 747 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACATCGAG 806 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| |||||||| || | ||||||||||| | || ||||| Sbjct 807 AGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTT 850 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||||||||| || || | ||| || || ||||| |||||||| ||||| || | | || Sbjct 171 TCTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGT 230 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| ||||| ||||| ||||||||||||| | ||| || || ||||| || Sbjct 231 TCTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCC 290 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||| | ||| || ||| || ||||| || ||||| || || || || | Sbjct 291 TTCTTTGTCCTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAA 350 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || || || | || || || || | |||||| Sbjct 351 GGTGATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||| | || | ||||||||| || ||||| | || || || || | || || Sbjct 399 TCTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAGAGGGT 458 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| ||||| || || ||||| || ||||| || | || ||||| || || || || || Sbjct 459 TCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACC 518 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| |||| || || |||||| || ||||||||||| | || || ||||| Sbjct 519 TTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAG 578 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | |||||||| |||||||| || ||||| Sbjct 579 AGTGATAGTCTTTCCAGTCAAAGTCTTAACGAA 611 >seq16451 Length=2876 Score = 86.0 bits (94), Expect = 1e-11 Identities = 129/182 (71%), Gaps = 10/182 (5%) Strand=Plus/Minus Query 160574 AGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAA 160633 ||||||||||| | ||||| || |||||| | |||||||| ||||| ||||| || Sbjct 1650 AGAGCCAGAGATCTATTCTATGCACTCTGGATCCCAGATCTTTTTATGAAAAGAGTCGAA 1591 Query 160634 GACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCC-----TGGACTTGATGATG 160688 | |||| || |||| || | ||||| |||| || ||| | |||| ||| || Sbjct 1590 AAGAATGAAGAATGGACTCTAATGTGTCCTAATG-AGTGCCCAGGTTTGACTACATGCTG 1532 Query 160689 TTTATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAA 160748 || || ||||||| |||||||||| ||| ||| |||||||||||| || || Sbjct 1531 ----GGGAGAAGAATTCGAGAAACTTTATGAAAAATATGAAGAAGAGGGAAGAGGCAGAA 1476 Query 160749 AG 160750 || Sbjct 1475 AG 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109120661018897