Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq19711 107 1e-18 seq20137 86.0 4e-12 >seq19711 Length=592 Score = 107 bits (118), Expect = 1e-18 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| |||||||| | ||| ||| || ||||| || ||||| ||||| ||| | || Sbjct 582 CTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGTGTTCTTCCA 523 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| || |||||||| || || |||| ||| || || | || | || |||||| Sbjct 522 TCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAATACCTTCCTTG 463 Query 34887 TCGCTA-ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTT 34943 || ||| ||||| ||||| || || || | || | ||||||||||| ||| Sbjct 462 TC-CTAGATCTTGGCCTTGAC--ATTCTCAATGGTATCTGAAGGCTCAACATCGAGGGTG 406 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || ||||| ||||| || ||||| | |||| Sbjct 405 ATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACATA 367 >seq20137 Length=989 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||| ||||||||||| || ||| ||| | |||| || Sbjct 412 ACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAGAGGGTTCTTCCATCCTCA 471 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || | || || || || | || | || || || || Sbjct 472 AGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTAG 531 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||| | | || | |||| | |||||| || | || || || ||| Sbjct 532 ATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTCTTT 591 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||| || ||||||| |||| Sbjct 592 CCAGTCAAAGTCTTAACGAAGATCTACATA 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324533141219448