Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq20138 118 8e-22 seq20137 116 3e-21 seq15980 114 1e-20 seq19711 107 2e-18 seq22430 100 2e-16 seq12690 96.9 3e-15 seq10285 95.1 1e-14 seq22432 86.0 5e-12 seq3881 84.2 2e-11 >seq20138 Length=732 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || ||||| || || ||||| || ||||| || | | ||||| |||| || Sbjct 154 AACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTTCCATCCTC 213 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | |||||| || || || ||||| | |||||||||||| || || ||||||||||||| Sbjct 214 AAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTA 273 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| |||| | |||||| | || || |||||||||| || || Sbjct 274 GATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTCTT 333 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || |||| ||| Sbjct 334 TCCAGTCAAAGTCTTAACGAAGATCTACAT 363 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | || || || |||||||| |||||||| || ||||||||||| | Sbjct 365 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 424 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || |||| ||| || ||||| || | | || |||||| || || Sbjct 425 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 484 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || ||||| || || || || | || | ||||||||| | || || Sbjct 485 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 544 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || || ||||| | |||||||| || || | ||| Sbjct 545 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACAT 591 >seq20137 Length=989 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||| | | || || ||||| || |||||||| | || || || || | | Sbjct 394 CCACCTCTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAG 453 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || | |||||| || || || ||||| | |||||||||||| || Sbjct 454 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 513 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||||||||||| || || || ||| |||| | |||||| | || || Sbjct 514 ATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACG 573 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || || ||||| || || || |||| ||| Sbjct 574 TCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | || || || |||||||| |||||||| || ||||||||||| | Sbjct 622 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 681 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || |||| ||| || ||||| || | | || |||||| || || Sbjct 682 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 741 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || ||||| || || || || | || | ||||||||| | || || Sbjct 742 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 801 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || || ||||| | |||||||| || || | ||| Sbjct 802 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACAT 848 >seq15980 Length=3053 Score = 114 bits (126), Expect = 1e-20 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | ||||||||||||||| |||||||| |||| || | || ||| | Sbjct 2398 CCTCCTCTGAGTCTTAAAACTAAATGAAGTGTAGATTCATTTTAAATTCTATATTCGTCC 2339 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | || || |||||| | || ||||| |||| | | |||||| || ||| Sbjct 2338 AAGGTGAAGTGATTTTCTAATTGCATTCCAGCAAAAATCATTCTTTATTGATCTGGAGGA 2279 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCA-GACGTTTCCAC 101421 || ||||||||||| | || ||||| ||||| ||| | || ||| | || || Sbjct 2278 ATTCCTTCTTTATCCTAAACTTTTTCTTTTAATGATTCAATTGTATCACCTCCATTGCA- 2220 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463 | || ||||| ||||| || |||||||||||||||||||| Sbjct 2219 GTAAATAGTGATTGTTTTTCCAGTTAAAGTTTTTACAAATAT 2178 >seq19711 Length=592 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | ||| || ||||| || ||||||||||| || ||||| ||| | Sbjct 366 CCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTG 307 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| | || || | || || || || || || | | |||||||||||| || Sbjct 306 AGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGG 247 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || || |||| | ||||| || | ||| || Sbjct 246 ATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACG 187 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| |||||||| || | ||||| || || || | ||| Sbjct 186 TCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACAT 140 Score = 86.0 bits (94), Expect = 5e-12 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 101245 TCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGAT 101304 |||||| | | || || || || || || ||||| ||||| |||||||| || | | Sbjct 592 TCCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAG 533 Query 101305 AGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAAT 101364 ||||| |||| ||||||||||| || || || || | | ||||||||||| ||||| Sbjct 532 TGTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAAT 473 Query 101365 GCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTC 101424 ||||| || || | || || || ||| | || | || || || | || || || Sbjct 472 ACCTTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATC 413 Query 101425 AAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || |||| || ||||| || | || || || || || | ||| Sbjct 412 GAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 >seq22430 Length=1213 Score = 100 bits (110), Expect = 2e-16 Identities = 157/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | ||||| ||||| || ||||||||| |||| || | || ||| | Sbjct 638 CCTCCTCTGAGTCTTAAAATTAAATTAAAGGTAGATTCATTTTAAATTCTATAGTCGTCC 697 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || |||||||| || ||||| |||| | | || || || || Sbjct 698 AAGGTCATTTCATCTTCTAATTGCTTTCCAGCAAACATCATTCTTTATTCATTTGGATGA 757 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA-CGTTTCCAC 101421 || |||||| |||| | || ||||| ||||| ||| | || ||| | || || Sbjct 758 ATTCCTTCTATATCCTAAACTTTTTCTTTTAATGATTCAATTGTATCACCTCCATTGCAG 817 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463 | || ||||| ||||| || |||||||||||||||||||| Sbjct 818 TA-AATAGTGATTGTTTTTCCAGTTAAAGTTTTTACAAATAT 858 >seq12690 Length=3036 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | | ||||| ||||| || ||||||||| |||| || | || ||| | Sbjct 639 CCTCCTCTGAGTCTTAAAATTAAATTAAAGGTAGATTCATTTTAAATTCTATAGTCGTCC 698 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || |||||||| || ||||| |||| | | || || || || Sbjct 699 AAGGTCATTTCATCTTCTAATTGCTTTCCAGCAAACATCATTCTTTATTCATTTGGATGA 758 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA-CGTTTCCAC 101421 || |||||| |||| | || ||||| ||||| ||| | || ||| | || || Sbjct 759 ATTCCTTCTATATCCTAAACTTTTTCTTTTAATGATTCAATTGTATCACCTCCATTGCAG 818 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463 | || || || ||||| || |||||||||||||||||||| Sbjct 819 TA-AATAGAGATTGTTTTTCCAGTTAAAGTTTTTACAAATAT 859 >seq10285 Length=3207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||||| | ||| ||||||||||| | || ||| ||| |||||| ||||| | Sbjct 879 TTCCACCTCTTAGCCTTAACACTAAATGAAGTCTTGAATCTCTTTATATATTATAATCAG 938 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | |||||| ||| || |||| || |||||||| || | | || |||||| || | Sbjct 939 CCAAAGTTCTATTATCTTCTAATTATTTCCCTGCAAAAATAAGTCTCTATTGATCAGGAG 998 Query 101361 GAATGCCTTCTTTATCTTGAAT 101382 | || |||||| |||||| || Sbjct 999 GGATACCTTCTGCATCTTGTAT 1020 >seq22432 Length=1210 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 |||||||||||||| | ||| | | || ||| || || || | | |||| || ||| Sbjct 631 TAAAACTAAATGAATTGCTGATGCATCTTATATTTTATAGTCATCCAGAGTTTTGTAATC 690 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 || |||| | | |||||||| ||||| | | |||||| || ||||| |||||| |||| Sbjct 691 TTCTAATTACATTCCTGCAAAAATCAATCTTTATTGATCTGGGGGAATCCCTTCTATATC 750 Query 101377 TTGAATTTTTTGTTTTA 101393 | || ||||| ||||| Sbjct 751 CTAAACTTTTTATTTTA 767 >seq3881 Length=979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 129/184 (70%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||||||||| | ||||||||| || || || || |||||||| ||||| || || | Sbjct 599 TTCCTCCTCTTAATCTTAAAACTAAGTGTAGAGTGGAATCTTTTTGAATATTATAGTCAG 658 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 || | |||||| || || | || || ||||| || || | || || ||| | | Sbjct 659 AGACATTTCTGGAGTCCTCTAGACCTTTTCCAGCAAAAATTAATCTCTATTAATCTGCTG 718 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| || | | |||||| || ||| | || | ||||||| | ||| | Sbjct 719 GAATACCTTCCTTCTATGAAATTTTAAACTTGACAGTCTCAATGGTGTCAGTTGGTTCAA 778 Query 101421 CTTC 101424 | || Sbjct 779 CATC 782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396155770534587