Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq23162 140 9e-29 seq23963 87.8 5e-13 >seq23162 Length=1931 Score = 140 bits (154), Expect = 9e-29 Identities = 176/239 (74%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 40776 GCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGTCTCG 40835 || ||||| || |||| | ||||||||||||||| || ||||| || ||||||||||| Sbjct 1714 GCGTATTGGAAGATTAAACGACCAAAGTAACCGTGAGCTGCTACAATATTATAAGTCTCT 1655 Query 40836 CCTTCCTGACC-AAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCGAAT 40894 |||| || || |||| ||||| | || ||||| |||| || || || ||||| Sbjct 1654 TCTTCTTGGCCGAAACGGTAACCCGCA-TTAGCAGATTCGTTTTCAGTTGTTTCGCGAAT 1596 Query 40895 GATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGACGCC 40954 | || |||||||| || || ||||| || | ||||| | ||| ||||| || || Sbjct 1595 TAAAGATGAAGTAACTAGCGAACCATGCATTGCTGAAAACAGCGAACCGCCAAATACACC 1536 Query 40955 TGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGACAA 41013 |||||| || | ||| ||||| || ||||| ||||| || || || || ||||| |||| Sbjct 1535 TGCAACACCTAACATGTGGAACGGATGCATAAGAATATTATGCTCGGCCTGGAATACAA 1477 >seq23963 Length=704 Score = 87.8 bits (96), Expect = 5e-13 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 40526 AGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACC 40585 ||| |||||||| ||||| || ||||| || |||||||| |||||||||||||||||||| Sbjct 564 AGCTGAAGCTAAATCTAGTGGGAAGTTATGTGCGTTACGTTCGTGCATTACTTCCATACC 505 Query 40586 TAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTAC 40645 || | | ||| | || |||||||| ||| | || || | || ||||| Sbjct 504 TAAGTTAGCACGGTTGATAATGTCAGCCCATGTATTTAATACACGGCCTTGAGAATCTAC 445 Query 40646 TACTGACTGGTTAAAGTT 40663 ||||| ||||| ||||| Sbjct 444 AACTGATTGGTTGAAGTT 427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143659071121794