Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq14610 95.1 2e-14 seq8961 89.7 7e-13 seq18645 84.2 3e-11 >seq14610 Length=3775 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 194239 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTAT 194297 || ||| ||||||| ||||||||| | || |||| | | ||||| ||||| ||||| Sbjct 2925 ATTCCTCAAATAGGAGATAAATTTGCTAGTAGACATGGAT-AGAAAGGTACTTGCGGTAT 2983 Query 194298 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 194357 || ||| |||||| ||| | |||||||| | ||||| ||||||||||| || | Sbjct 2984 GACTTACAGACAAGAGGATCTACCATTTACTAGAGAGGGTATCGTACCAGATATGATAGT 3043 Query 194358 CAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 ||||| || |||||| || |||||||||||| Sbjct 3044 TAATCCTCATGCTATTCCATCAAGAATGACCATT 3077 >seq8961 Length=5717 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 52399 GGTTAAAAGACAATTGATAGATGGCGATGATGTACTATTAAATAGGCAACCGACACTTCA 52458 |||| ||||||| || | |||||| ||| || |||| |||||||| || | ||||| Sbjct 4351 GGTTGAAAGACATTTAAGAGATGGTGATATGGTTTTATTTAATAGGCAGCCATCTCTTCA 4292 Query 52459 TAAAGCTTCTATGCAAAGTTTTAAAGTT--AAAATTCAACCAGTAAAAACATTTAAAATG 52516 |||| ||||| || | | | || | |||||| ||| | |||||||| | || Sbjct 4291 TAAAATGTCTAT--AATGGGTCATAGGTCTAAAATTTTACCTTTCTCAACATTTAGATTG 4234 Query 52517 AATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGAGATGA 52563 ||| | || | |||| | |||||||||||||||||||||||||| Sbjct 4233 AATCTTTCTGTTACTACTCCCTATAATGCTGATTTTGATGGAGATGA 4187 >seq18645 Length=3966 Score = 84.2 bits (92), Expect = 3e-11 Identities = 169/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 194551 ATGTATTGCGGGTTTACTGGTaaaaaaaTTGAAAATAAAATTTTTATAGGGCCAACTTAT 194610 |||||| || || | |||||| || | || || || || |||| |||||||| Sbjct 536 ATGTATAATGGTTTCAATGGTAAGAAGCTCGAGGTTATGATCTTCCTAGGCCCAACTTAC 477 Query 194611 TACCATCGTCTTAAACACATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGG---CAA 194667 || || |||||||| || ||||| | |||||||| ||| ||||| | || || || Sbjct 476 TATCAGCGTCTTAAGCATATGGTCGATGATAAAATTCATTCTAGAGG-CAGAGGTCCCAC 418 Query 194668 GTAACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTT 194727 ||| | || || ||| ||||||| | || || |||| | ||||||| | | ||| Sbjct 417 TTAAATCCTC-AC-TCGCCAACCAACTGAAGGACGCTCTCGTGATGGAGGTCTTCGCTTT 360 Query 194728 GGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACTCAATTCTTAAATGAAAGA 194787 ||||||||||| |||||||| || || || || ||| ||| | || ||||| Sbjct 359 GGAGAAATGGAGCGTGACTGTATGATATCACACGGAGCCTCTCGCTTCCTTAAGGAAAGG 300 Query 194788 ATGTTT 194793 ||||| Sbjct 299 CTGTTT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632288855707080