Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq19711 102 5e-17 seq20138 91.5 1e-13 seq20137 89.7 3e-13 >seq19711 Length=592 Score = 102 bits (112), Expect = 5e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| ||||| ||| | ||| ||||| ||||| || ||||| || || | | || Sbjct 582 CTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGTGTTCTTCCA 523 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| |||||||||||||||||| |||| ||| || || | || | || |||||| Sbjct 522 TCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAATACCTTCCTTG 463 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTA 34940 || | || || ||||| || || || | || | ||| ||||| | ||| | Sbjct 462 TCCTAGATCTTGGCCTTGAC--ATTCTCAATGGTATCTGAAGGCTCAACATCGAGGGTGA 405 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || ||||||||||| || ||||| | ||| Sbjct 404 TGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 >seq20138 Length=732 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || |||| ||| | ||| |||||| |||||||| ||||| || ||| | | || Sbjct 149 CTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTTCCA 208 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||||||||||||||| |||| || || || || | || | || || || Sbjct 209 TCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTA 268 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||||| | | || | ||| | | ||| || |||| || || Sbjct 269 TCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATA 328 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || | ||||| || ||||||| ||| Sbjct 329 GTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 >seq20137 Length=989 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827 ||||| ||| | ||| |||||| |||||||| ||||| |||| | | | |||| || Sbjct 183 GACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTC 242 Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887 || || || || |||||||| |||| | || || | || | || || ||||| | Sbjct 243 TAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTCCTA 302 Query 34888 TATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 || || || || || || || | ||| || ||| ||||| | ||| ||||| Sbjct 303 AATCTTGGCCTTAAC--ATTCTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGTT 360 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| |||||||| ||||| Sbjct 361 TTACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||| ||||| || || |||| ||||||||||| || ||| | | || Sbjct 406 CTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAGAGGGTTCTTCCA 465 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||||||||||||||| |||| || || || || | || | || || || Sbjct 466 TCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTA 525 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||||| | | || | ||| | | ||| || |||| || || Sbjct 526 TCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATA 585 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || | ||||| || ||||||| ||| Sbjct 586 GTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325592013447029