Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq10285 138 2e-27 seq20137 109 9e-19 seq15980 104 4e-17 seq19711 100 4e-16 seq20138 98.7 2e-15 seq3881 93.3 7e-14 seq22430 87.8 3e-12 seq22432 86.0 1e-11 >seq10285 Length=3207 Score = 138 bits (152), Expect = 2e-27 Identities = 156/207 (75%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 146053 TAACAGGAAAAACAATTACTATTGATGTAGAA--CATAACGATACTATTCAAAATGTAAA 146110 |||| |||||| ||||||||| |||||||| |||||| | | ||| | || |||| Sbjct 1085 TAACTGGAAAAGTAATTACTATAGATGTAGAGAGCATAACCACA--ATTGAGGATTTAAA 1028 Query 146111 AAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGG 146170 | | |||||| | |||||| || || || |||||| | ||||| ||||||||||| Sbjct 1027 ATAGTTGATACAAGATGCAGAAGGTATCCCTCCTGATCAATAGAGACTTATTTTTGCAGG 968 Query 146171 TAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTAT 146230 ||| ||||||| ||||||||||| || | |||||||||||| ||| ||| || | | Sbjct 967 GAAATAATTAGAAGATAATAGAACTTTGGCTGATTATAATATATAAAGAGATTCAAGACT 908 Query 146231 CCATTTAGTATTACGATTAAGAGGAGG 146257 |||||||| ||| | ||||||| || Sbjct 907 TCATTTAGTGTTAAGGCTAAGAGGTGG 881 >seq20137 Length=989 Score = 109 bits (120), Expect = 9e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 146037 ATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACT 146096 || ||| | || || || || ||||| || || ||| |||| || || | || || || Sbjct 614 ATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACC 555 Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156 ||| ||||||| || ||| || || ||||||||| || |||||||||||||| ||| Sbjct 554 ATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGA 495 Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216 | ||||| || || || ||| | || ||| ||||| | | || ||||| || | Sbjct 494 TTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTCTCTGACTATAACATCTAG 435 Query 146217 AAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 |||||||| ||| | || || || | || ||||||| |||| Sbjct 434 AAAGAATCAACTCTTCACTTGGTCCTCAGACTAAGAGGTGGTA 392 >seq15980 Length=3053 Score = 104 bits (114), Expect = 4e-17 Identities = 162/229 (71%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGA-TGTA--GAACATA 146088 || ||||||| ||||||| ||||| ||||||||||| |||||| | || | | | | Sbjct 2173 TGGAAATATTTGTAAAAACTTTAACTGGAAAAACAATCACTATTTACTGCAATGGAGGT- 2231 Query 146089 ACGATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATC 146148 ||||| ||| || ||||| | ||| | | ||||||||| ||||| || |||| Sbjct 2232 --GATACAATTGAATCATTAAAAGAAAAAGTTTAGGATAAAGAAGGAATTCCTCCAGATC 2289 Query 146149 AACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATA 146208 || ||||| | |||||||| || | |||||||| || | || || || |||| Sbjct 2290 AATAAAGAATGATTTTTGCTGGAATGCAATTAGAAAATCACTTCACCTTGGACGAATATA 2349 Query 146209 ATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || |||| ||||| || | |||||||| ||| || | |||||||| Sbjct 2350 GAATTTAAAATGAATCTACACTTCATTTAGTTTTAAGACTCAGAGGAGG 2398 >seq19711 Length=592 Score = 100 bits (110), Expect = 4e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||| ||| | ||||| | || || ||||| || || | || || |||| | Sbjct 141 TGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACCCTCAG 200 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || ||| || ||| || ||||| || || |||||||||| Sbjct 201 ACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAAC 260 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || || ||| || | || || ||||| | | || || || | Sbjct 261 AGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACTACAACA 320 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||||||||| ||| | || || || | |||| |||||||||| ||||| || Sbjct 321 TCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGGTATGTAAATCTT 378 Score = 93.3 bits (102), Expect = 7e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||| ||| | || || | || || || || || || | ||||| || | | | Sbjct 369 TGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCAG 428 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || | || ||||| ||||| |||||||||| Sbjct 429 ATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAAC 488 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| || || || || || ||||| || ||| ||||| | | || || |||| Sbjct 489 AAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAATA 548 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGA 146255 | ||||| ||||| ||| |||| || || || || | |||||| Sbjct 549 TTCAAAAGGAATCCACTCTCCACTTGGTCTTGAGACTTAGAGGA 592 >seq20138 Length=732 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 146037 ATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACT 146096 || ||| | || || || || ||||| || || ||| |||| || || | || || || Sbjct 357 ATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGTGACACC 298 Query 146097 ATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGA 146156 ||| ||||||| || ||| || || ||||||||| || |||||||||||||| ||| Sbjct 297 ATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAACAGAGA 238 Query 146157 CTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAA 146216 | ||||| || || || ||| | || ||| ||||| | | || || || || ||| Sbjct 237 TTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTTTCTGACTACAACATTCAA 178 Query 146217 AAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 || || || || |||| || || | || | ||||| ||| Sbjct 177 AAGGAGTCAACCCTCCACTTGGTTCTCAGACTCAGAGGTGGT 136 >seq3881 Length=979 Score = 93.3 bits (102), Expect = 7e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 || |||| ||||| ||| || | | ||||| | ||| || ||||| |||| | | Sbjct 826 TGTAAATCTTCATTAAATCAATCTCTGGAAAGAGCATTGTAATCGATGTTGAACCAACTG 767 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | | ||| || |||||| | || ||||| |||||| | ||| || Sbjct 766 ACACCATTGAGACTGTCAAGTTTAAAATTTCATAGAAGGAAGGTATTCCAGCAGATTAAT 707 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | |||||||| || ||| |||| || |||| | | || ||||||| Sbjct 706 AGAGATTAATTTTTGCTGGAAAAGGTCTAGAGGACTCCAGAAATGTCTCTGACTATAATA 647 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | |||||||| || ||| | || ||||| ||| ||||||||||||| Sbjct 646 TTCAAAAAGATTCCACTCTACACTTAGTTTTAAGATTAAGAGGAGG 601 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 146129 AGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAA 146188 ||| ||||| || | ||||| | || || || ||||| || ||||| |||| ||||| Sbjct 267 AGAGGGCATCCCTGCTGATCAGTAGAGGCTGATATTTGCTGGAAAACAGCTAGAGGATAA 208 Query 146189 TAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248 ||| | | || | ||||| |||||| |||||||| |||||| || | || | |||| Sbjct 207 TAGGATGATATCCGATTACAATATAGCTAAAGAATCAACTATCTATCTTGTTCTCAGATT 148 Query 146249 AAGAGGAGG 146257 ||||||||| Sbjct 147 AAGAGGAGG 139 >seq22430 Length=1213 Score = 87.8 bits (96), Expect = 3e-12 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGA-TGTA--GAACATA 146088 || ||||||| ||||||| ||||| ||||||||||| |||||| | || | | | | Sbjct 863 TGGAAATATTTGTAAAAACTTTAACTGGAAAAACAATCACTATTTACTGCAATGGAGGT- 805 Query 146089 ACGATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATC 146148 ||||| ||| || ||||| | ||| | | || |||||| |||| || || Sbjct 804 --GATACAATTGAATCATTAAAAGAAAAAGTTTAGGATATAGAAGGAATTCATCCAAATG 747 Query 146149 AACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATA 146208 || ||||| | || ||||| || || |||||||| ||| | | || || || |||| Sbjct 746 AATAAAGAATGATGTTTGCTGGAAAGCAATTAGAAGATGAAATGACCTTGGACGACTATA 687 Query 146209 ATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 || |||| ||||| || | ||||| | ||| || | ||||||||| Sbjct 686 GAATTTAAAATGAATCTACCTTTAATTTAATTTTAAGACTCAGAGGAGGT 637 >seq22432 Length=1210 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 146035 AAATATTCATAAAAACATTAACAGGAAAAACAATTACTATT-GATGTA---GAACATAAC 146090 |||||| ||||||| | || ||||| || |||| ||| | |||| || || Sbjct 839 AAATATATGTAAAAACTCTGACTGGAAAGACGATTAATATACGCTGTAATGGAGCA---- 784 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| || | ||||| | ||| | | || |||||| ||||| || |||||| Sbjct 783 GATACAATTGAAGAAATAAAATAAAAAGTTTAGGATATAGAAGGGATTCCCCCAGATCAA 724 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||||| | ||||||||||| | ||||||| ||| | | ||| | || ||||| Sbjct 723 TAAAGATTGATTTTTGCAGGAATGTAATTAGAAGATTACAAAACTCTGGATGACTATAAA 664 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 ||| || | | ||| | || |||||||| ||| || | | |||||| Sbjct 663 ATATAAGATGCATCAGCAATTCATTTAGTTTTAAGACTTAATGGAGGT 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785916880611720