Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq20138 116 3e-21 seq19711 114 1e-20 seq5918 113 3e-20 seq20137 96.9 3e-15 >seq20138 Length=732 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| || || || || || ||||||||||| || || | || ||| | ||| Sbjct 152 AGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTTCCATCC 211 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || || || | |||||||| || ||||| || || ||||| ||||| ||| Sbjct 212 TCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCT 271 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 | | || |||||| |||| | |||||| | | || || |||||||| ||||| Sbjct 272 TAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTC 331 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || ||||| || |||| ||| Sbjct 332 TTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 >seq19711 Length=592 Score = 114 bits (126), Expect = 1e-20 Identities = 166/233 (71%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||||| ||||| || ||||||||||| ||||| || || Sbjct 366 CCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTG 307 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | || ||||||| ||| ||||| | || | ||| || ||||| || || Sbjct 306 AGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGG 247 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || || || |||| | ||||| || |||| || Sbjct 246 ATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACG 187 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT-TTTAA 29791 || | || |||||||||||||| | ||||||||| || || | ||| ||||| Sbjct 186 TCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACATCTTTAA 134 >seq5918 Length=2920 Score = 113 bits (124), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 |||||||| || |||||||| ||||| || || || || | | ||| | ||| || Sbjct 2610 ACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTTCCATCTTCC 2669 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | || || || ||| | |||| ||| || ||||| || || || || ||||||||||| Sbjct 2670 AATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGGATTCCTTCTTTGTCTTG- 2728 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | || || | |||| |||||||| |||| || || ||||| || || || Sbjct 2729 AATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACGTCTAGAGTAATCGTCTT 2788 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 ||| || || || || || ||||||| ||||||| Sbjct 2789 GCCCGTCAAAGTCTTGACGAATATCTACATTTTA 2822 >seq20137 Length=989 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| || || || || || ||||||||||| || || | | ||| | | ||| || Sbjct 184 ACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCT 243 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || ||||| ||||| | || | ||| | ||||| || ||||| || |||||||| | Sbjct 244 AGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTCCT-A 302 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | || ||| | || | |||||||| | || || || | || || ||||| Sbjct 303 AATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGTTTT 362 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | ||| |||||||| || ||||| Sbjct 363 ACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385099992835131