Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq8961 105 8e-18 seq14610 95.1 2e-14 seq18645 91.5 2e-13 >seq8961 Length=5717 Score = 105 bits (116), Expect = 8e-18 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 51851 GGTTAAAAGACAATTGATGGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCA 51910 |||| ||||||| || | ||||||||| || |||| |||||||| ||| | ||||| Sbjct 4351 GGTTGAAAGACATTTAAGAGATGGTGATATGGTTTTATTTAATAGGCAGCCATCTCTTCA 4292 Query 51911 TAAAGCTTCTATGCAAAGTTTTAAAGTT--AAAATTCAACCAGTAAAAACATTTAAAATG 51968 |||| ||||| || | | | || | |||||| ||| | |||||||| | || Sbjct 4291 TAAAATGTCTAT--AATGGGTCATAGGTCTAAAATTTTACCTTTCTCAACATTTAGATTG 4234 Query 51969 AATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACAT 52028 ||| | || | |||| | |||||||||||||||||||| |||||||||||| | | Sbjct 4233 AATCTTTCTGTTACTACTCCCTATAATGCTGATTTTGATGGAGATGAAATGAATATGTTT 4174 Query 52029 GTTCCTCAATCATATG-GAGCTACTGCTGAATTACAAGAA 52067 ||||| || |||| ||||| || ||| || ||||| Sbjct 4173 GTTCCATAAAATTATGAGAGCT-TGGCGGAAGTAAAAGAA 4135 >seq14610 Length=3775 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193501 || ||| ||||||| ||||||||| | || |||| | ||||| ||||| ||||| Sbjct 2925 ATTCCTCAAATAGGAGATAAATTTGCTAGTAGACATGGAT-AGAAAGGTACTTGCGGTAT 2983 Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561 || ||| |||||| ||| | |||||||| ||||| ||||||||||| || | Sbjct 2984 GACTTACAGACAAGAGGATCTACCATTTACTAGAGAGGGTATCGTACCAGATATGATAGT 3043 Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||| || ||||||||| |||||||||||| Sbjct 3044 TAATCCTCATGCTATTCCATCAAGAATGACCATT 3077 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 193024 TTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTT 193083 ||||||||||| ||||||| |||||||| |||||||| ||| |||| || |||||| | Sbjct 2482 TTAATGCTATTATTGCTATTGCTTGCTACACTGGTTACAATTAAGAGGATTCTATTATGT 2541 Query 193084 TAAATAAAGCTTCTATTGAAAGAGGATTATT 193114 | ||| | | ||||||| |||||||| || Sbjct 2542 TGAATTAGAGTGCTATTGATAGAGGATTTTT 2572 >seq18645 Length=3966 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 193755 ATGTATTGTGGGTTTACTGGTAAAAGAATTGAAAATAAAATTTTTATAGGGCCAACTTAT 193814 |||||| ||| || | |||||| | | || || || || |||| |||||||| Sbjct 536 ATGTATAATGGTTTCAATGGTAAGAAGCTCGAGGTTATGATCTTCCTAGGCCCAACTTAC 477 Query 193815 TATCATCGTCTTAAACATATGGTTAAGGATAAAATGCATGCTAGAAGTCATGGACA-AGT 193873 ||||| |||||||| |||||||| | |||||||| ||| ||||| | || | | | Sbjct 476 TATCAGCGTCTTAAGCATATGGTCGATGATAAAATTCATTCTAGAGGCAGAGGTCCCACT 417 Query 193874 GACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGG 193933 | | | || ||| ||||||| | || || |||| | ||||||| | | ||||| Sbjct 416 TAAATCCTCAC-TCGCCAACCAACTGAAGGACGCTCTCGTGATGGAGGTCTTCGCTTTGG 358 Query 193934 AGAAATGGAGAAAGACTGTATTTTAGTTCATGGTGCTACTCAATTCTTGAATGAAAGAAT 193993 |||||||||| |||||||| || || || || ||| ||| | || ||||| | Sbjct 357 AGAAATGGAGCGTGACTGTATGATATCACACGGAGCCTCTCGCTTCCTTAAGGAAAGGCT 298 Query 193994 GTTT 193997 |||| Sbjct 297 GTTT 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634976002569480