Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq20138 176 9e-39 seq20137 176 9e-39 seq19711 176 9e-39 seq5918 163 6e-35 seq3881 113 9e-20 seq15980 84.2 4e-11 seq10285 84.2 4e-11 >seq20138 Length=732 Score = 176 bits (194), Expect = 9e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 82579 ACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAAT 82638 || |||||||||| | | || || ||||| || || ||||||||||| ||||| |||| Sbjct 360 ACATACCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAAT 419 Query 82639 CAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698 ||||||| |||| |||||||||| || |||||||||||||| ||||| | |||||| | Sbjct 420 CAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAG 479 Query 82699 GAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT 82758 | || || || ||||| ||||| ||||| || || || || ||||| || ||| || | Sbjct 480 GTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCT 539 Query 82759 CTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTA 82815 |||| || | ||| || ||||| || || | || ||||| || || | |||| ||| Sbjct 540 CTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTTTA 596 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | ||||| ||||| || || || || || || || || || ||||| Sbjct 136 ACCACCTCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGA 195 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || |||| || || || ||||| ||||| || || || | ||| |||||||| || || Sbjct 196 AAGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGG 255 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| ||||||| ||||| || || ||||||||||| || ||| |||| || || Sbjct 256 GATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAAC 315 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||| || ||||| ||||| || || |||| ||| Sbjct 316 GTCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 >seq20137 Length=989 Score = 176 bits (194), Expect = 9e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 82579 ACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAAT 82638 || |||||||||| | | || || ||||| || || ||||||||||| ||||| |||| Sbjct 617 ACATACCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAAT 676 Query 82639 CAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698 ||||||| |||| |||||||||| || |||||||||||||| ||||| | |||||| | Sbjct 677 CAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAG 736 Query 82699 GAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT 82758 | || || || ||||| ||||| ||||| || || || || ||||| || ||| || | Sbjct 737 GTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCT 796 Query 82759 CTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTA 82815 |||| || | ||| || ||||| || || | || ||||| || || | |||| ||| Sbjct 797 CTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTTTA 853 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| | | || || ||||| ||||| |||||||||| || ||||| |||| Sbjct 392 TACCACCTCTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAG 451 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || |||| || || || ||||| ||||| || || || | ||| |||||||| || | Sbjct 452 AGAGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTG 511 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| ||||||| ||||| || || ||||||||||| || ||| |||| || | Sbjct 512 GGATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAA 571 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | ||| || ||||| || ||||| ||||| || || |||| ||| Sbjct 572 CGTCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 >seq19711 Length=592 Score = 176 bits (194), Expect = 9e-39 Identities = 178/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 82579 ACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAAT 82638 || ||||||||||||| | ||||| ||||| ||||| |||||||| || || || || | Sbjct 371 ACATACCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGT 312 Query 82639 CAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTG 82698 | ||| |||| |||||||| |||| ||||||||| ||||| ||||| |||||||| | Sbjct 311 CGCTGAGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGG 252 Query 82699 GAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT 82758 |||| || |||||||| ||||| ||||| || || || |||||||| || || |||| Sbjct 251 GAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTT 192 Query 82759 CTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || ||||| || || || ||||| || | || || || || || | ||| Sbjct 191 CAACGTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACAT 140 Score = 145 bits (160), Expect = 1e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 82586 TCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAG 82645 |||||| | | || || ||||| ||||| ||||| || || ||||| || ||||| || Sbjct 592 TCCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAG 533 Query 82646 AATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTAT 82705 |||| || ||||| | ||| ||||| || ||||| |||||||||||||| || || || Sbjct 532 TGTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAAT 473 Query 82706 TCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTC 82765 |||||||| || | ||||| || || ||||| ||||| ||||| ||| || || || Sbjct 472 ACCTTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATC 413 Query 82766 CAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || |||||||| || | ||||| || || || | ||| Sbjct 412 GAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTACAT 368 >seq5918 Length=2920 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | | || || || || ||||| ||||| || || ||||| || ||||| Sbjct 2592 CCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGAC 2651 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | |||| || ||||| | || ||||| |||||||| ||||| |||||||| || || Sbjct 2652 AAGGTTCTTCCATCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGG 2711 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 |||||||| || ||||||||||| || || || || || || || ||| ||||| || Sbjct 2712 ATTCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACG 2771 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || | ||| ||||||||||| ||||| ||||| || ||||||| |||| Sbjct 2772 TCTAGAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACATT 2819 >seq3881 Length=979 Score = 113 bits (124), Expect = 9e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | | ||||||||| ||||| || ||||| || |||||||| ||||| Sbjct 601 CCTCCTCTTAATCTTAAAACTAAGTGTAGAGTGGAATCTTTTTGAATATTATAGTCAGAG 660 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | |||| ||| ||||| |||||||||||| |||| ||| | || ||||| || Sbjct 661 ACATTTCTGGAGTCCTCTAGACCTTTTCCAGCAAAAATTAATCTCTATTAATCTGCTGGA 720 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| | | ||| || || ||| | ||||| || ||| | ||||| || Sbjct 721 ATACCTTCCTTCTATGAAATTTTAAACTTGACAGTCTCAATGGTGTCAGTTGGTTCAACA 780 Query 82764 TC 82765 || Sbjct 781 TC 782 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||| || | ||||| | | | ||| |||||||| |||||| ||||| ||| Sbjct 139 CCTCCTCTTAATCTGAGAACAAGATAGATAGTTGATTCTTTAGCTATATTGTAATCGGAT 198 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | || ||| || ||||| |||||||||||||| || || || | ||||| | ||| Sbjct 199 ATCATCCTATTATCCTCTAGCTGTTTTCCAGCAAATATCAGCCTCTACTGATCAGCAGGG 258 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || | | | |||||||| ||| || | |||| |||||| | || || || Sbjct 259 ATGCCCTCTCTGGCATTAATCTTTGATTTAACGCTCTCAACTGTATCAGTGGGCTCAACA 318 Query 82764 TC 82765 || Sbjct 319 TC 320 >seq15980 Length=3053 Score = 84.2 bits (92), Expect = 4e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||||| ||| |||||||||| || | ||||| |||||||||||| |||||||| ||||| Sbjct 2324 TTCTAATTGCATTCCAGCAAAAATCATTCTTTATTGATCTGGAGGAATTCCTTCTTTATC 2265 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 | || ||| |||||| |||||| |||||| Sbjct 2264 CTAAACTTTTTCTTTTAATGATTCAATTGTATCA 2231 >seq10285 Length=3207 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| || || | || ||| | | |||||||||||||| | | ||||| |||||| Sbjct 899 ACTAAATGAAGTCTTGAATCTCTTTATATATTATAATCAGCCAAAGTTCTATTATCTTCT 958 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 | || ||| || ||||| || ||||| | |||||| ||||| || ||||| |||||| Sbjct 959 AATTATTTCCCTGCAAAAATAAGTCTCTATTGATCAGGAGGGATACCTTCTGCATCTTGT 1018 Query 82722 ATCTTTGCTTTTACATTTTCAATCGT 82747 ||| ||||| || ||||| || Sbjct 1019 ATCAACTATTTTAAATCCTCAATTGT 1044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981507789827549