Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5918 116 9e-21 seq20137 107 5e-18 seq19711 98.7 2e-15 >seq5918 Length=2920 Score = 116 bits (128), Expect = 9e-21 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 206163 TAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA 206222 ||||||||| |||||| ||| || | || || || ||||| ||| | || || || Sbjct 2822 TAAAATGTA---GATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGA 2766 Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | |||||||| | || || ||| ||||||||||| ||||||||||| || Sbjct 2765 ACCCTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCC 2706 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || || ||||| ||||| || |||||| | |||||||||||||| || ||| | || Sbjct 2705 TGATCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGA 2646 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||| |||| || || || ||||| || | || |||||||| Sbjct 2645 CTACAATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAGACT 2601 >seq20137 Length=989 Score = 107 bits (118), Expect = 5e-18 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||| ||||| || || || || ||||||||| |||| Sbjct 377 AAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCTGACACAATCGAGAAT 318 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA---AGACTTATC 206301 || ||| |||||| | || |||||||||||| || || |||| ||||||||| Sbjct 317 GTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGA---TCAATAGAGACTTATC 261 Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361 ||||| || || ||| | |||||||| || || || | || |||||| | || || ||| Sbjct 260 TTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAACATTCAAAAGGAG 201 Query 206362 TCTACTCTTCACCTTGTTTTGAGACT 206387 || || || ||| | || || ||||| Sbjct 200 TCAACCCTCCACTTGGTCTTAAGACT 175 >seq19711 Length=592 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| | || || || ||| || || | || Sbjct 383 AAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCAGATACCATTGAGAAT 442 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| | || || ||||| ||| || || ||||||||||||||| Sbjct 443 GTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAACAAAGACTTATCTTC 502 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| |||||||||||||| || | | || ||||| | || || || || Sbjct 503 GCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAATATTCAAAAGGAATCC 562 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||| | || ||||||||| || Sbjct 563 ACTCTCCACTTGGTCTTGAGACTTAGA 589 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 || ||||||||| || | ||| ||||| || || || || | ||| ||||||| | || Sbjct 589 TCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGTGT 530 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||||| |||||||||||||||||||| | ||||||| Sbjct 529 TCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGA 484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181436327472111