Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq23162 183 9e-42 seq23963 89.7 2e-13 >seq23162 Length=1931 Score = 183 bits (202), Expect = 9e-42 Identities = 182/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 20009 GTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGT 20068 |||||||| ||||| ||||| ||||| ||||| |||||||||||| | ||||| || ||| Sbjct 1479 GTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAGGT 1538 Query 20069 GTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTG 20128 ||||| || || || || || || ||||| |||||||| ||||| || || | | Sbjct 1539 GTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAATT 1598 Query 20129 CGTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAG 20188 || || || |||||| | ||| | || |||||| || || |||||||||||| Sbjct 1599 CGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAGAG 1658 Query 20189 ACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGC 20244 || ||||| || ||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct 1659 ACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 89.7 bits (98), Expect = 2e-13 Identities = 96/126 (76%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 20249 TTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 20308 |||||||| |||||||| ||||||||||| | ||||| ||||| || ||| | || ||| Sbjct 46 TTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCTGG 105 Query 20309 TTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAG 20368 || | || || || | || |||||||| || || || ||||| || || ||||| || Sbjct 106 TTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT-AATTTTAATGAG 164 Query 20369 TCCCTT 20374 ||||| Sbjct 165 CCCCTT 170 Score = 80.6 bits (88), Expect = 8e-11 Identities = 94/127 (74%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 20355 TCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACA 20414 ||||||| ||||| || || | || | || ||||| | |||| |||||||||| Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 20415 TTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCC 20474 || |||| |||||||| | || | || || ||||| ||||| || || |||||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 20475 CACTTGA 20481 |||| || Sbjct 545 CACTAGA 551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148783925419278