Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq23162 183 9e-42 seq23963 86.0 2e-12 >seq23162 Length=1931 Score = 183 bits (202), Expect = 9e-42 Identities = 182/236 (77%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || ||||| ||||| ||||| ||||| ||||| |||||||||||| | || ||||| || Sbjct 1479 GTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAGGT 1538 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || || || || ||||| ||| |||||||| |||||||| || || || || | | Sbjct 1539 GTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAATT 1598 Query 29257 CGTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAG 29316 || || || |||||| || ||| || |||||| || || |||||||||||| Sbjct 1599 CGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAGAG 1658 Query 29317 ACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGC 29372 |||||||| || ||||| ||||||||||||||||| ||||| ||||||||||| || Sbjct 1659 ACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 86.0 bits (94), Expect = 2e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 29515 GGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTA 29574 || ||||| | ||||| |||||||| || |||| || |||||| | || | |||||| Sbjct 457 GGCCGTGTATTAAATACATGGGCTGACATTATCAACCGTGCTAACTTAGGTATGGAAGTA 516 Query 29575 ATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCTACA 29619 ||||| || ||||| || |||||||||||||| ||| | ||| || Sbjct 517 ATGCACGAACGTAACGCACATAACTTCCCACTAGATTTAGCTTCA 561 Score = 80.6 bits (88), Expect = 8e-11 Identities = 88/116 (76%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 29377 TTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 29436 ||||| || |||||||| ||||||||||| | ||||| ||||| || ||| | || ||| Sbjct 46 TTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCTGG 105 Query 29437 TTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAA 29492 || | || || || | || |||||||| || || || ||||| |||| ||||| Sbjct 106 TTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGG-GTTAATTTTAA 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146621377663286