Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq19711 113 4e-20 seq20138 95.1 1e-14 seq20137 95.1 1e-14 seq15980 82.4 7e-11 >seq19711 Length=592 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||| || | || || ||||| | || || ||| | ||||| | || || ||| || Sbjct 137 AAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACCC 196 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 || || || || | || || || || || || || ||||| || |||||| Sbjct 197 TCAGACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGAT 256 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || || |||||||| | || || ||| |||||||||| | |||| | ||||||| ||| Sbjct 257 CAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACTAC 316 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || ||||||||||| || |||| || || | |||||||||||||| Sbjct 317 AACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGG 366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || || ||||| || |||||||| |||||||| || | || ||| || ||| | ||| Sbjct 461 GACAAGGAAGGTATTCCCCCCGATCAACAAAGACTTATCTTCGCCGGAAAGCAATTGGAA 520 Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 |||| |||| | || |||||||||||||| |||||||| | || || || || Sbjct 521 GATGGAAGAACACTTTCTGACTACAATATTCAAAAGGAATCCACTCTCCACTTGGTCTTG 580 Query 25388 AGATTGAGAGGA 25399 ||| | |||||| Sbjct 581 AGACTTAGAGGA 592 >seq20138 Length=732 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||| || | || ||||||||| | |||||||| | || || |||| || || ||| Sbjct 594 AAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGA-GCC 536 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | || ||||| ||| | || || || || || || |||||||| || || || Sbjct 535 ATCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGA 476 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| | |||||||| | | || || || | ||||| | |||| | ||||| Sbjct 475 TCAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTA 416 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||| || |||||||| ||| |||| || || || ||| | |||||||| Sbjct 415 CAATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 365 >seq20137 Length=989 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||| || | || ||||||||| | |||||||| | || || |||| || || ||| Sbjct 851 AAAATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGA-GCC 793 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | || ||||| ||| | || || || || || || |||||||| || || || Sbjct 792 ATCTGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGA 733 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| | |||||||| | | || || || | ||||| | |||| | ||||| Sbjct 732 TCAATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTA 673 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||| || |||||||| ||| |||| || || || ||| | |||||||| Sbjct 672 CAATATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 622 >seq15980 Length=3053 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 ||| || || | ||||||||||| ||||| |||||| | ||||| || | | | | Sbjct 2169 AACTTGGAAATATTTGTAAAAACTTTAACTGGAAAAACAATCACTATTTACTGCAATGGA 2228 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 ||||| || || | ||||| ||||| || |||||||| || || || || ||| Sbjct 2229 GGTGATACAATTGAATCATTAAAAGAAAAAGTTTAGGATAAAGAAGGAATTCCTCCAGAT 2288 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || ||||| | |||| | || | ||| | ||| || | | | ||| || Sbjct 2289 CAATAAAGAATGATTTTTGCTGGAATGCAATTAGAAAATCACTTCACCTTGGACGAATAT 2348 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||| |||| ||||| || |||||||||| |||||| | |||||||| Sbjct 2349 AGAATTTAAAATGAATCTACACTTCATTTAGTTTTAAGACTCAGAGGAGG 2398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444953132601120