Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq10285 91.5 1e-13 seq19711 82.4 6e-11 seq5918 82.4 6e-11 >seq10285 Length=3207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432 ||||||| | || ||||||| ||| || ||| ||||||||||| || |||| ||| || Sbjct 994 TGATCAATAGAGACTTATTTTTGCAGGGAAATAATTAGAAGATAATAGAACTTTGGCTGA 935 Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || ||| ||| ||| || | ||| |||||||| || ||| || |||| ||| Sbjct 934 TTATAATATATAAAGAGATTCAAGACTTCATTTAGTGTTAAGGCTAAGAGGTGGA 880 >seq19711 Length=592 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 106254 TTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAA 106313 ||||| ||| |||| || |||||||| | |||||||| || || ||| |||| ||| Sbjct 134 TTAAAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAA 193 Query 106314 CCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTT 106373 ||| || | ||| | ||||| || || ||||| ||||| | || Sbjct 194 CCCTCAGACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCC 253 Query 106374 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGAT 106433 |||||||| || || || | || || ||| || | ||||| | |||| | |||| Sbjct 254 GATCAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGAC 313 Query 106434 TACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||||| ||||||||||| || || || || || | || || ||||||| Sbjct 314 TACAACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGG 366 >seq5918 Length=2920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||| | || || || || || ||||| |||||||| ||||| | || |||||| Sbjct 2821 AAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACCC 2762 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || | | | | ||||| || ||| ||||||||||| | ||| |||| Sbjct 2761 TCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGAT 2702 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 ||||| || || || | ||| || || |||| |||||| | ||| || || ||| Sbjct 2701 CAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTAC 2642 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAG 106474 || || ||||| ||||| || || ||||| || ||||| Sbjct 2641 AATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAG 2604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402205097973728