Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5918 122 9e-23 seq20138 104 2e-17 seq20137 104 2e-17 seq19711 98.7 1e-15 >seq5918 Length=2920 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||||||||| ||| || | || || |||||||||||||| || |||||||| | | Sbjct 2592 CCACCTCTGAGTCTCAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGAC 2651 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | | || |||||||| |||| | ||| ||||| || || Sbjct 2652 AAGGTTCTTCCA-TCTTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGG 2710 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| |||||||| || || || || | ||||| || | ||| || Sbjct 2711 GATTCCTTCTTTGTCTTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAAC 2770 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||| |||||||| || || || || ||||| || ||||| || | |||||| Sbjct 2771 GTCTAGAGTAATCGTCTTGCCCGTCAAAGTCTTGACGAATATCTACATTTT 2821 >seq20138 Length=732 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||||||||| | || | ||| || || || |||||||||||||||||||| | Sbjct 137 CCACCTCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 196 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || || || || || |||||||| | ||| |||||||| || Sbjct 197 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 256 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| |||| || || ||||| || | ||||| | || ||| Sbjct 257 ATACCTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACG 316 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || ||||| |||||||| || | ||| Sbjct 317 TCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||| ||| || | ||| || || ||||| || || || ||||| || Sbjct 365 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 424 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| || | | || || ||||| || | | || ||||| || || Sbjct 425 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 484 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| || | ||||| || | || || Sbjct 485 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 544 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||||||||| || || ||||| | ||||| ||||| |||| |||||| Sbjct 545 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 594 >seq20137 Length=989 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||||||||| || || | ||| || || || |||||||||||||||||||| Sbjct 166 CCACCTCTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAT 225 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || |||||||| || || || || | | || |||||||| || Sbjct 226 AAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGA 285 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| || | ||| || || || || | |||||| || | || || Sbjct 286 ATTCCTTCTTTGTCCTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACA 345 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||||||||| || | || ||||| || |||||||| Sbjct 346 TCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||| ||| || | ||| || || ||||| || || || ||||| || Sbjct 622 CCTCCTCTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGAT 681 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| || | | || || ||||| || | | || ||||| || || Sbjct 682 AGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGG 741 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| || | ||||| || | || || Sbjct 742 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACA 801 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||||||||| || || ||||| | ||||| ||||| |||| |||||| Sbjct 802 TCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 851 >seq19711 Length=592 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | || | || | ||| || || ||||| ||||| ||||||||||||| Sbjct 366 CCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTG 307 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| ||||| | ||| || || || || | | ||| |||||||| || Sbjct 306 AGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGG 247 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665 || ||||| || ||||| || || || || | | ||||| |||| || | ||| || Sbjct 246 ATACCTTCCTTGTCTTGGATCTTAGCCTTCAC-GTTTTCAATGGTGTCTGAGGGTTCAAC 188 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||| | || || ||||| || || | ||||||||||| |||| ||| || Sbjct 187 GTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACATCTT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505237992865320