Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq23162 168 8e-37 seq23963 95.1 1e-14 >seq23162 Length=1931 Score = 168 bits (186), Expect = 8e-37 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 158178 TTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTG 158237 |||||||||| || || || || || |||||||| |||||||| ||| | |||||||| | Sbjct 1477 TTGTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAG 1536 Query 158238 GGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCG 158297 | ||||| || || || || || || || |||||||| || |||||||| || | Sbjct 1537 GTGTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAA 1596 Query 158298 TTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAG 158357 |||| ||||| ||||||| || || || ||||| ||||| |||||||||| Sbjct 1597 TTCGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAG 1656 Query 158358 AGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 158415 |||| || || || || ||||| || || ||||| |||||||| |||||||||||||| Sbjct 1657 AGACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 158526 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 158585 ||||||||||||| || | | ||| ||| || ||||| || || || ||||| || Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 158586 TACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 158645 | | ||||| ||| | ||||||||||| ||||| || ||||||||||| ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 158646 CACTGGATCTTGCTGCTGCT 158665 |||| ||| | ||| | ||| Sbjct 545 CACTAGATTTAGCTTCAGCT 564 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 158418 CATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCT 158477 ||||||||||| |||||| || ||||||||| | ||||| ||||| ||||| | |||| Sbjct 44 CATTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCT 103 Query 158478 GGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTT 158526 |||| || || | || | ||||| ||||| |||||||| ||||| || Sbjct 104 GGTTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572842129345200