Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq23162 181 1e-40 seq23963 93.3 5e-14 >seq23162 Length=1931 Score = 181 bits (200), Expect = 1e-40 Identities = 183/238 (77%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 158881 TTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTG 158940 |||||||||| || || || || || |||||||| |||||||| ||| | |||||||| | Sbjct 1477 TTGTATTCCAGGCCGAGCATAATATTCTTATGCATCCGTTCCACATGTTAGGTGTTGCAG 1536 Query 158941 GGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCG 159000 | ||||| || || || || || || || |||||||| || |||||||| || | Sbjct 1537 GTGTATTTGGCGGTTCGCTGTTTTCAGCAATGCATGGTTCGCTAGTTACTTCATCTTTAA 1596 Query 159001 TTCGTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 159060 |||| ||||| ||||||| || || || |||||| ||||| |||||||||| Sbjct 1597 TTCGCGAAACAACTGAAAACGAATCTGCTAATGCGGGTTACCGTTTCGGCCAAGAAGAAG 1656 Query 159061 AAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGC 159118 | || |||||||| || ||||| || |||||||| |||||||| |||||||||||||| Sbjct 1657 AGACTTATAATATTGTAGCAGCTCACGGTTACTTTGGTCGTTTAATCTTCCAATACGC 1714 >seq23963 Length=704 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 159121 CATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCT 159180 ||||||||||| |||||| || ||||||||| | ||||| ||||| ||||| | |||| Sbjct 44 CATTCAACAACAGCCGTTCATTACACTTCTTCTTAGCTGCTTGGCCAGTTGTATGTATCT 103 Query 159181 GGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTT 159229 |||| || || | || | ||||| ||||| |||||||| ||||| || Sbjct 104 GGTTTACAGCTTTAGGTTTATCAACAATGGCTTTCAACCTTAACGGGTT 152 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 159229 TCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATG 159288 ||||||||||||| || | | ||| ||| || ||||| || || || ||||| || Sbjct 425 TCAACTTCAACCAATCAGTTGTAGATTCTCAAGGCCGTGTATTAAATACATGGGCTGACA 484 Query 159289 TACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCC 159348 | | |||||||| | ||||||||||| ||||| || ||||||||||| ||||||| Sbjct 485 TTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAACGTAACGCACATAACTTCC 544 Query 159349 CACTCGACCTTGCTGCTGCT 159368 |||| || | ||| | ||| Sbjct 545 CACTAGATTTAGCTTCAGCT 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552298251785280