Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq19711 122 7e-23 seq16451 114 1e-20 seq20137 91.5 1e-13 seq5918 91.5 1e-13 >seq19711 Length=592 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | | ||||| || | || || |||||||| || ||||||||||| Sbjct 366 CCTCCTCTCAATCTAAGAACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTG 307 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | |||||||||| | ||| || ||| | ||||| | ||||||||| || || Sbjct 306 AGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGG 247 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| || || || |||||| |||| | |||| | ||||||| || |||||| Sbjct 246 ATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACG 187 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| |||||| || || ||||| || ||||||| ||| Sbjct 186 TCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAACGAAGATTTACAT 140 >seq16451 Length=2876 Score = 114 bits (126), Expect = 1e-20 Identities = 152/207 (73%), Gaps = 7/207 (3%) Strand=Plus/Plus Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674 ||||||||||| | ||| | | |||| ||| |||| |||||||| | ||| || | | Sbjct 1562 GGACACATTAGAGTCCATTCTTCATTCTTTTCGACTCTTTTCATAAAAAGATCTGGGATC 1621 Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAA 131734 || | || || || |||||||| ||| | || |||||| | |||| | || |||| || Sbjct 1622 CAGAGTGCATAGAATAGATCTCTGGCTCTATTTTCTTCT-TTGCCATGA-TTCTTTCTAA 1679 Query 131735 TTTAAA--AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTT 131792 ||||| ||||| |||| || |||||||| ||||| | ||| || || | ||| |||| Sbjct 1680 GTTAAAGGAAGTCATAAATATCAGCATGCCAAGGTTCTACATAGACAGCAAATGCTCCTT 1739 Query 131793 TGCGCTT---ACCGCCTTGATTAACAT 131816 | | ||| ||| ||||||| ||||| Sbjct 1740 TTCTCTTTCCACCTCCTTGATCAACAT 1766 >seq20137 Length=989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 27036 AATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTC 27094 || ||||| || | || || || |||||||| |||||||| | | | ||| | | || Sbjct 181 AAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTAC-CATC 239 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| ||||||||||| ||| | || || | || |||||| || || | || ||||| || Sbjct 240 TTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTC 299 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| || | | || | ||||| | || ||||| |||| || || | Sbjct 300 CTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGT 359 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || || || || ||||||||||||||| Sbjct 360 TTTACCAGTGAGGGTCTTAACAAAGATTTGCATA 393 >seq5918 Length=2920 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| |||||||| | || || || ||||| ||||||||||| || | | | | || Sbjct 2606 CAAGACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTTCCATC 2665 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | | || || || | || || | ||||||||| || || | || ||||| || Sbjct 2666 TTCCAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGGATTCCTTCTTTGTC 2725 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| |||| | | |||| ||||| | || |||||| |||||||| || | Sbjct 2726 TTGAATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACGTCTAGAGTAATCGT 2785 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||||||| ||| || || || || | ||| Sbjct 2786 CTTGCCCGTCAAAGTCTTGACGAATATCTACAT 2818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424802902854792