Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10356 185 1e-41 seq6480 172 6e-38 seq16451 156 5e-33 seq5752 105 8e-18 >seq10356 Length=2916 Score = 185 bits (204), Expect = 1e-41 Identities = 659/1016 (65%), Gaps = 17/1016 (2%) Strand=Plus/Plus Query 104248 CATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA 104307 ||| ||||||||| ||||||| | || || | ||| ||||| || || ||| | | Sbjct 794 CATTGGTATTCATAAGGAAGACTTGGAGTCAGCCTTTGAGACCTATGATCTTATGAGCAA 853 Query 104308 AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAAT 104367 | || | ||| || || || || ||||||||| |||||||||||| ||| |||| Sbjct 854 CCTCTTCTTTACTCATGCTACTCCCACTCTCTTCAATTCTGGTACACCAAAACCATAAAT 913 Query 104368 GTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCT 104427 | ||||||||| | | | || || || ||| | | || || | || ||| || Sbjct 914 GAGTTCTTGCTTCCTACTTACGACTAAAGAAGATTCAGTTGAAGGCATATTTGAAACACT 973 Query 104428 TACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA-CATCCA-TGAT 104485 | | |||| || || || ||||| |||||||| || | || | | | Sbjct 974 GAAATAAATTGCGGTTATTTCGAAAGCCGCTGGTGGTATTGG--TGTATCAGTTAGTAAC 1031 Query 104486 GTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCA 104545 | | || | | | || |||| | || ||||| ||| | | || | |||| Sbjct 1032 ATACGTGCGACTGACTCCTATATTAGAGGCACAAACGGTTATGCCACAGGACTAGTTCCT 1091 Query 104546 ATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTC---GAAAG 104602 | || || ||||| | ||| ||||||||||| | ||| ||| | |||| Sbjct 1092 CTTCTGAAAGTGTTTAATGACACTGCGCGCTATGTCGACTAAGGTGGCGGGAAAAGAAAA 1151 Query 104603 GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTG 104662 ||| | | || || ||| ||||||||||||| ||||| ||| || ||| | ||||| Sbjct 1152 GGAGCCTTTGCTGTTTATGTTGAGCCATGGCATGCGGACATCTACGACTTCTTATAGTTG 1211 Query 104663 CGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGAT 104721 | ||||| ||| | |||||| | | || || ||| | |||| || |||||||| Sbjct 1212 AGGAAGAACCATGGTAAGGAGGAGAA-CAGAGCTCGTGATTTGTTCTATGCCCTCTGGAT 1270 Query 104722 TCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGA 104781 |||||||| ||||||| ||||| || ||| || | ||| |||| | || || | Sbjct 1271 CCCAGATCTTTTCATGAGAAGAGTAGAAAAGAATGAACACTGGACTCTAATGTGCCCTAA 1330 Query 104782 CAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAG-T 104840 || || || | ||| || ||| ||||| ||||| || ||| ||||| | Sbjct 1331 TGAGTGCCCAGGATTGAGTGATACCTGGGGAGAGGAATTTGACAAGCTCTAC-CAAAGCT 1389 Query 104841 ACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG--TGTGGAAAGCTAT 104898 | || ||| ||||| | | | ||| | ||| |||| | ||| || || Sbjct 1390 ATGAAGAACAAGGTAGAGGCAGAAAGACCATATAAGCAA--GATGGCTATGGTAATAGAT 1447 Query 104899 TCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCA 104958 | | |||| ||| |||||||||||||| || ||||||||||| || | || || Sbjct 1448 TATAGAGTCACAACTAGAGACTGGTACACCCTATATGCTTTACAAGGATACGTGCAATAG 1507 Query 104959 AAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTT 105018 |||| ||| | | |||||||| || || ||||| ||| | ||||| ||||| | Sbjct 1508 AAAGTCTAACTAGCAAAATTTGGGAACAATAAAAAGTTCAAATTTGTGTACTGAAATTGT 1567 Query 105019 GGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAA 105078 |||| |||| ||||| |||||| |||||| | || ||| | || || || | Sbjct 1568 TGAATATACATCTCCTGATGAAGTGGCTGTTTGTAACTTGGCTTCAGTAGCACTACCAAG 1627 Query 105079 GTATGTGGATCCAGAGACAA-AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAA 105137 |||||| | |||||||| ||| ||||||||||| ||| || ||| || || | Sbjct 1628 GTATGTAAAGAAAGAGACAAGAGA-GTTTGATTATGATTTACTTCATTCAGTAACAAAGA 1686 Query 105138 CTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTC 105197 | || ||||| || || | || |||||| | || | || || || || ||| Sbjct 1687 GAATAACTAAAAATCTGAATAAGGTGATTGATGGGAACTACTATCCAGTCAAGGAGGCTG 1746 Query 105198 GTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGAT 105253 | ||||||| |||||| | || ||||| || |||||| | || |||| ||| Sbjct 1747 AATATTCTAATAAGAGACATAGACCCATTGGACTTGGTGTTTAAGGATTCGCTGAT 1802 >seq6480 Length=2904 Score = 172 bits (190), Expect = 6e-38 Identities = 564/864 (65%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || || || ||| || |||| || | ||||||||||| ||||| |||||||||| Sbjct 780 CCTCAATAAATGCTCTTGCGTGTTTCAGTCGGTATTCATAAAGAAGATATTGATTCTGCA 839 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | || ||||| || ||| | | ||||| |||||| || || || || || Sbjct 840 ATTGAAACATATAACCTTATGAGTGATAGATGGTTCACTCACGCTACTCCTACTCTATTT 899 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 ||||| || || || | ||| |||||| ||| || ||| | || | ||||| || Sbjct 900 AATGCCGGAACTCCTAAACCTCAAATGAGCAGCTGTTTCTTGCTCATGATGAAGGATGAT 959 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 ||||| | ||||| |||| ||| | | | | || | ||||| ||| | ||||| Sbjct 960 TCAATTATGGGTATATATGATACTTTGAAGAATATCGCTCTTATCTCTAAGAGTGCTGGA 1019 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || |||| | | ||| | | ||||| | | ||| || ||| ||||| Sbjct 1020 GGAGTTGGACTTGCTGTTCATAACATTAGAGCTACTGGATCCTACATCAAGGGAACAAAC 1079 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 ||||| || |||| || | || ||||| | || || || | || || || |||||| Sbjct 1080 GGTCATTCTAATGGCCTTGTACCCATGCTGAGAGTCTTCAATGAAACTGCCCGTTATGTA 1139 Query 104582 AATCAAGCTGGGCGTC---GAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 |||||| ||| || |||| |||||| |||| ||||| | || ||||||||||| Sbjct 1140 GATCAAGGTGGTGGTAAGAGAAAAGGATCTTTCGCCATCTATTTAGAACCATGGCACGCT 1199 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||| | || ||||| || | ||| || || ||| | ||||| | | || | Sbjct 1200 GACATCTTTGATTTCCTATAGCTCCGTAAAAATCACGGTAAAGAGGA-ACAAAGAGCAAG 1258 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 ||||| |||| ||| | ||| |||| |||||||| ||| | ||||| || | ||| Sbjct 1259 AGATCTTTTCTTTGCTTTGTGGGTTCCTGATCTCTTTATGGAAAGAGTAAGAGATAATGG 1318 Query 104758 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGA 104817 | ||| | | || || || | | || ||| | | || | | || || || Sbjct 1319 AGACTGGACCTTATTCTGCCCCAATGAAGCCAAGGGTTTATTTGAGGTCCACGGAGAAGA 1378 Query 104818 GTT--TGAAGCCCTTTACACAAAGTACGAGGAAGAAGG--TCGGGCGACTGCGACGGTGC 104873 ||| | ||| || ||||| | ||||| |||| || |||| || || | Sbjct 1379 GTTCGTTAAG--CTATACACTAGATACGAACAAGAGGGTATCGGCAGA--AAAACTATTA 1434 Query 104874 CAGCTGCCGATGTGTGGAAAGCTATT-CTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 |||| | | ||| |||||||| | || || ||| || ||||| || |||||| Sbjct 1435 AAGCTCAAAAACTTTGGGAAGCTATTATTGAAAGCT-AAATTGAAACTGGAACTCCATAC 1493 Query 104933 ATGCTTTACAAAGACGCCTG-TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 |||||||||||||| | || ||| || |||||| |||||||| | || ||||| Sbjct 1494 ATGCTTTACAAAGA-TCATGCCAACAGTAAAAGTAATTAAAAGAATCTTGGAACCATCAA 1552 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 ||| || || || ||| || ||| | |||| ||| | ||||||| ||||| || Sbjct 1553 GAGCTCTAACCTTTGTTGTGAGATCATTGAATATACTTCCCCAGATGAGGTAGCTGTATG 1612 Query 105052 TAACCTCGCATCAATCGCTCTCCC 105075 || | ||||||||| | || || Sbjct 1613 CAATTTAGCATCAATCTCACTTCC 1636 >seq16451 Length=2876 Score = 156 bits (172), Expect = 5e-33 Identities = 616/953 (65%), Gaps = 21/953 (2%) Strand=Plus/Minus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||||| ||| || || || || || ||||| || ||||| |||| ||| | ||| Sbjct 2029 GTTCACTCATGCTACTCCTACACTTTTCAACGCAGGTACCCCAAAACCTTAGATGAGTTC 1970 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 ||| ||||| | | | || || || || | | ||||||| || ||| || | | | Sbjct 1969 TTGTTTCCTATTAACTATGAAAGAAGATTCTGTAGAAGGTATCTTTGAAACACTCAAGTA 1910 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 104493 ||| ||||| ||| || || || ||||| | || ||| | ||||| Sbjct 1909 AATTGCTGTTATCTCCAAGGCCGCAGGTGGCATTGGAGTATCAGTCTCAGATATAAGAGC 1850 Query 104494 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 104553 | ||| |||| | || || || ||| | || | || || |||| |||||| Sbjct 1849 AGCAGATTCTTATATTAGAGGAACTAACGGTTATGCAAACGGACTTGTTCCTATGCTTAA 1790 Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTC---GAAAGGGATCTAT 104610 || ||||| | ||| || | ||||| |||||| || | |||| ||| | | Sbjct 1789 AGTTTTTAATGACACTGCTAGGTATGTTGATCAAGGAGGTGGAAAGAGAAAAGGAGCATT 1730 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 || |||||| | || || ||||| || ||||| || |||||| | | | || Sbjct 1729 TGCTGTCTATGTAGAACCTTGGCATGCTGATATTTATGACTTCCTTTAACTTAGAAAGAA 1670 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 || || | || || | | | ||||| |||| || |||||||| |||||||| Sbjct 1669 TCATGGCAAAGAAGAAAATAGAGCCAGAGATCTATTCTATGCACTCTGGATCCCAGATCT 1610 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACC 104790 || ||||| ||||| || ||| || | ||| |||| | ||||| | || || Sbjct 1609 TTTTATGAAAAGAGTCGAAAAGAATGAAGAATGGACTCTAATGTGTCCTAATGAGTGCCC 1550 Query 104791 TGGTCT--CTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAA 104848 ||| | || | |||| | ||| || || || || ||||| ||| || || ||| Sbjct 1549 AGGTTTGACTAC-ATGCTG-GGGAGAAGAATTCGAGAAACTTTATGAAAAATATGAAGAA 1492 Query 104849 GAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG--TGTGGAAAGCTA--TTCTCAA 104904 || || | | | ||| | ||| |||| | |||| |||| || | | Sbjct 1491 GAGGGAAGAGGCAGAAAGACTATAAAGGCTA--GATGGTTATGGA--GCTAGATTGTAGA 1436 Query 104905 GTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAG 104964 ||||||| |||||||| || ||||| ||||| |||||||| | |||||| ||| Sbjct 1435 ATCTCAAATTGAGACTGGAACTCCATATATGCTATACAAAGATACTTGTAACAGAAAATC 1376 Query 104965 TAATCAAAAGAATTTGGGTGTG-ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 |||| || | || |||| ||| || || ||||| ||||||||||| ||||| | |||| Sbjct 1375 TAATTAACAAAACCTGGG-GTGCATAAAAAGTTCAAATCTCTGTACTGAAATTGTAGAAT 1317 Query 105024 TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG 105083 ||| | |||||| ||||| ||||| || || ||||| || | || || || Sbjct 1316 ATACTAGCCCAGATGAAGTAGCTGTATGTAATCTAGCCTCAATAGCCTTAAACAGGTTTG 1257 Query 105084 TGGATCCAGAGAC-AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 | | |||| || ||||| || ||| ||||| || | || || ||||| |||| | Sbjct 1256 TAAAAACAGAAACTAAAGA-ATATGACTATGAGAAGTTGCATGATGTTACCAAAAGAATT 1198 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG-TTGAGACTGCTCGTAA 105201 || || || |||||| | ||||||| |||| |||||| | || ||| || | | Sbjct 1197 ACTAAGAATTTAAACAAGATAATTGATAATAATTATTACCCAGTTTCAGA-AGCAAGATA 1139 Query 105202 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG 105254 || ||| | | ||| | || |||||| | |||||| | ||| | || |||| Sbjct 1138 TTCAAATCTTAAACATAGACCCATTGGTATTGGTGTTTAAGGTTTTGCAGATG 1086 >seq5752 Length=1520 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 94797 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 || |||||| ||||| | || || || | |||| || || ||||| || || || || Sbjct 673 CTATGCTGAAAGACTCGTTGCTTTCGCTGCTATTGAAGGAATTTTCTTTTCAGGGTCTTT 614 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||| | || | ||||| || ||||| |||||||||||||| ||| ||||| || || Sbjct 613 CTGCTCAATCTTCTGGCTAAAAAAGCGTGGTCTCATGCCAGGCCTCACTTTCTCAAATGA 554 Query 94917 GCTTATCTCTCGTGACGAGGG 94937 ||||||||||||||| ||||| Sbjct 553 GCTTATCTCTCGTGATGAGGG 533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583075680312840