Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5752 188 8e-43 seq5918 140 4e-28 seq20138 132 5e-26 seq20137 132 5e-26 seq19711 129 7e-25 seq10356 107 2e-18 >seq5752 Length=1520 Score = 188 bits (208), Expect = 8e-43 Identities = 413/610 (68%), Gaps = 8/610 (1%) Strand=Plus/Minus Query 64351 TTCTGGACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAAC 64410 |||||||| | || ||| | |||||||||| ||| | | || ||||| | || ||| Sbjct 1029 TTCTGGACTGCAGAAGAGATCGATCTCGCCACTGATGTTAAAGATTGGGAGAGACTCAAC 970 Query 64411 TCACAGGAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATT 64470 | |||| |||||||| ||| || ||||| ||||||||| | |||||||| ||| Sbjct 969 GATAACGAACGCCACTTCATTAAGCACGTTCTAGCTTTCTTCGCAGCTAGTGACGGTATT 910 Query 64471 GTGTTTGAGAATTTGGACCTAA-ATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTC 64529 || |||||||||||| | || ||| | || | | | || |||| || || || | Sbjct 909 GTAGTTGAGAATTTGGCTCAAAGATTCTGCACTGAAATCTAAG-TCCCTGAAGCACGTTG 851 Query 64530 ATTCTATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGAT 64589 ||||||| | | | | | || | ||||| ||||| ||||| ||| | || Sbjct 850 CTTCTATGGATTTTAAATGATGATGGAGAACATTCACTCAGAGACCTATTCTCTCCTTAT 791 Query 64590 TGACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGT 64649 ||| | || || | || | ||||||||| || |||| ||||| | | Sbjct 790 TGATACCCTTATTAGCGACGCCTAGGAGAAGGATATGCTCTTCAAAGCTATCTCCTTTAT 731 Query 64650 ACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTCG-TCGT 64708 || | ||||||||| || ||||||||||| || | ||||| | | | | | | | Sbjct 730 CCCAGTTGTTACTAAGAAAGCTGAATGGGCAATGAGATGGATCAGT--TCAGACAATAGC 673 Query 64709 T-TGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 | || | | | |||| ||||| || | | ||||||||||||||||| ||||| ||| Sbjct 672 TATGCTGAAAGACTCGTTGCTTTCGCTGCTATTGAAGGAATTTTCTTTTCAGGGTCTTTC 613 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || || || ||||||||||||||||| || || |||||||| || | || || || ||| Sbjct 612 TGCTCAATCTTCTGGCTAAAAAAGCGTGGTCTCATGCCAGGCCTCACTTTCTCAAATGAG 553 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTC 64887 || |||||||| || ||||| | ||| || || || | ||| | || ||||| Sbjct 552 CTTATCTCTCGTGATGAGGGCATGCACACTGATTTCGCTTGTCTCCTATACAAGCACCTT 493 Query 64888 AAGGACAAACCATCACATGGGACTATAATTGATAT-AGTAAAATCGGCTGTAGAAATTGA 64946 || | ||| |||| ||| || || |||| || | || | | ||||| ||||||| Sbjct 492 AACAATAAAATATCAAATGAGAGAATCCTTGAGATCATTACCAAC-GCTGTTTAAATTGA 434 Query 64947 AAAGGAATTC 64956 | |||||| Sbjct 433 ACTTGAATTC 424 >seq5918 Length=2920 Score = 140 bits (154), Expect = 4e-28 Identities = 175/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 ||||| | || |||| | || || |||||||| | || |||||||| |||||||| || Sbjct 2831 AAATAGAAGTAAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGA 2772 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 ||||| | ||| | ||| | || ||||||| || ||||| ||||| || ||||| Sbjct 2771 CGTTGAACCCTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAAT 2712 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 || || || || ||| | || || ||||| || ||| || | || |||| | ||| | Sbjct 2711 CCCCCCTGATCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTT 2652 Query 27573 AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||| ||||||||||||||||||| ||| | |||||| | || | ||||| Sbjct 2651 GTCTGACTACAATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAGACTCAGAGGTGG 2592 >seq20138 Length=732 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||| ||||||| || || || |||||||| |||||||||||||| || || ||| || Sbjct 592 AATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCATC 533 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| || | ||||| || || || ||||||||||| || || || || || Sbjct 532 TGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGATCA 473 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | || || |||||||| ||| || | || || | | |||||| | || || || Sbjct 472 ATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTACAA 413 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || ||||| || ||||| | |||||| | ||| | || || Sbjct 412 TATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 365 >seq20137 Length=989 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||| ||||||| || || || |||||||| |||||||||||||| || || ||| || Sbjct 849 AATGTAAATCTTCGTAAAAACACTTACCGGAAAGACTATTACTCTCGATGTAGAGCCATC 790 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| || | ||||| || || || ||||||||||| || || || || || Sbjct 789 TGACACTATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCACCTGATCA 730 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | || || |||||||| ||| || | || || | | |||||| | || || || Sbjct 729 ATAGAGACTCATCTTTGCTGGAAAGTAATTAGAAGACGGCAGAACCCTATCTGATTACAA 670 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || ||||| || ||||| | |||||| | ||| | || || Sbjct 669 TATCCAGAAAGAATCAACCCTTCACTTGGTCTTGAGACTTAGAGGAGG 622 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| ||||| || || || || || || || | || |||||| | | Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || ||| ||||||| || |||||||| || || || Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGATCAA 273 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || || |||||||| || || || |||| | | ||| || | ||||| || Sbjct 272 TAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAAC 213 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | |||||||| || || || || | ||||| Sbjct 212 ATTCAAAAGGAGTCAACCCTCCACTTGGTCTT 181 >seq19711 Length=592 Score = 129 bits (142), Expect = 7e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| ||||||| || ||||| || || |||||||| || || || || |||||| | Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||||| || || |||||||||| || ||||| || || || Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || || || || || |||||| | || |||| | || || | ||||| ||| Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624 | ||||||||||||||||| || | |||||| | ||| Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTTGAGACTT 586 >seq10356 Length=2916 Score = 107 bits (118), Expect = 2e-18 Identities = 345/520 (66%), Gaps = 19/520 (4%) Strand=Plus/Minus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 || |||| || || || ||||| || |||| | |||| | || || ||||| || ||| Sbjct 1612 GAAGCCAAGTTACAAACAGCCACTTCATCAGGAGATGTATATTCAACAATTTCAGTACAC 1553 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027 ||||| ||| || ||||| |||| |||| || ||| ||||| ||||| | ||| Sbjct 1552 AAATTTGAACTTTTTATTGTTCCCAAATTTTGCTAGTTAGACTTTCTATTGCACGTATCC 1493 Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087 ||||| ||| || || ||||| ||||| | ||||||| | || | ||| | | Sbjct 1492 TTGTAAAGCATATAGGGTGTACCAGTCTCTAGTTGTGACTCTATAATCTATTACCATAGC 1433 Query 81088 TCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA-CTTGGCGTA-AGCTT 81145 | || | | ||| | | | | |||| | |||| ||| | ||| ||||| Sbjct 1432 CATCTTGCTTATATGGTCTTTCTGCCTCTACCTTGTTCTTCATAGCTTTG-GTAGAGCTT 1374 Query 81146 CGTCGAACTTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 ||| || | | || | || ||| | | |||||||||| ||||||||||| || Sbjct 1373 -GTCAAATTCCTCTCCCC-AGGTATCACTCAATCCTGGGCACTCATTAGGGCACATTAGA 1316 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGC-CTTC--ATGAAAGCGTCAGGGATCCAGAGGGCG 81261 ||||| || || |||| | | | |||| |||||| || |||||||||||||| Sbjct 1315 GTCCAGT--GT-TCATTCTTTTCTACTCTTCTCATGAAAAGATCTGGGATCCAGAGGGCA 1259 Query 81262 GTGAACAGGTCGCGGCAGCGCGC--CTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAA 81319 ||||| || || ||| | |||||| | ||| ||||| | ||||| | | Sbjct 1258 TAGAACAAATCACG--AGCTCTGTTCTCCTCCTTACCATGGTTCTTCCTCAACTATAAGA 1201 Query 81320 AGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGC---GAC 81376 |||| ||||||||||||||||||||| | ||| || || | | || || | | Sbjct 1200 AGTCGTAGATGTCCGCATGCCATGGCTCAACATAAACAGCAAAGGCTCCTTTTCTTTTCC 1141 Query 81377 GGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 |||||| | || ||| || || ||||| | ||||| || Sbjct 1140 CGCCACCTTAGTCGACATAGCGCGCAGTGTCATTAAACAC 1101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570129390607920