Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq19711 91.5 9e-14 seq20137 86.0 4e-12 seq20138 82.4 5e-11 >seq19711 Length=592 Score = 91.5 bits (100), Expect = 9e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 34483 CCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGT 34542 |||||||| | ||| ||||| ||||||||| ||||||||||| || || || |||||| Sbjct 591 CCTCTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGT 532 Query 34543 GTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACT 34602 |||| | ||||| | ||| || ||||| || || | | ||||| || || || | Sbjct 531 GTTCTTCCATCTTCCAATTGCTTTCCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAATA 472 Query 34603 CCCTCCTTGTCTGTGATCTT 34622 || |||||||| |||||| Sbjct 471 CCTTCCTTGTCCTAGATCTT 452 >seq20137 Length=989 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || | || ||||| ||||| || ||||||||||||||| || || || Sbjct 165 GCCACCTCTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGA 224 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | |||| | ||||| || |||||||| || || || | | || ||| || || || Sbjct 225 TAAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGG 284 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||| || ||||| ||| || | ||||| | |||||||| | ||| | Sbjct 285 AATTCCTTCTTTGTCCTAAATC-TTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAA 343 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || |||||||| || | || || ||||| || ||||| Sbjct 344 CATCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCAT 392 >seq20138 Length=732 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| || | | ||||| ||||| || ||||||||||||||| || || ||| Sbjct 137 CCACCTCTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAA 196 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | || |||||||| || ||||| || || || | |||||| || || || Sbjct 197 AGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAAATCAATCTCTGTTGATCGGGTGGG 256 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | || || || ||| |||||| Sbjct 257 ATACCTTCTTTATCTTAGATCTT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314632206040103