Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq20138 131 1e-25 seq5918 127 2e-24 seq20137 104 2e-17 seq19711 100 2e-16 >seq20138 Length=732 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| |||| || || || ||| |||| || ||| |||| |||||||| || || || Sbjct 363 ATGTAGATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGT 304 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||| |||||||| || |||||||||||| Sbjct 303 GACACCATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAA 244 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | || || | ||| |||| || |||||| Sbjct 243 CAGAGATTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTTTCTGACTACAAC 184 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 |||||||||||||| ||| | || |||||| Sbjct 183 ATTCAAAAGGAGTCAACCCTCCACTTGGTT 154 >seq5918 Length=2920 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| ||||||| || || ||| |||| |||||| | |||||||| || || ||||| || Sbjct 2818 ATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACCCTCT 2759 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||||||||||||||||| || || || |||||| Sbjct 2758 GACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGATCAA 2699 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || |||||||||| | ||| | || || ||||| Sbjct 2698 CAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTACAAT 2639 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 || |||||||| || || | |||||||| ||| Sbjct 2638 ATCCAAAAGGAATCCACTCTCCATTTGGTCTTG 2606 >seq20137 Length=989 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || || || | || || | || || || || || Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || ||| | ||||||||||| || || ||||||||| Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAGGACAAAGAAGGAATTCCCCCCGATCAA 273 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || ||||| | ||||| || ||| | || || |||||| Sbjct 272 TAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAAC 213 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 |||||||||||||| ||| | || ||||| || Sbjct 212 ATTCAAAAGGAGTCAACCCTCCACTTGGTCTT 181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| |||| || || || ||| |||| || ||| |||| |||||||| || || || Sbjct 620 ATGTAGATCTTCGTTAAGACTTTGACTGGAAAGACTATCACTCTTGACGTTGAGCCTAGT 561 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||| |||||||| || |||||||||||| Sbjct 560 GACACCATTGAAAATGTCAAGGCTAAGATCTAAGATAAAGAAGGTATCCCACCCGATCAA 501 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||| || ||| | || || | ||| | || || || ||| Sbjct 500 CAGAGATTGATTTTCGCCGGAAAGCAACTTGAGGATGGAAGAACCCTCTCTGACTATAAC 441 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || | || || || || | || ||||| Sbjct 440 ATCTAGAAAGAATCAACTCTTCACTTGGT 412 >seq19711 Length=592 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || || || || || |||||| | || || || || || || || || Sbjct 368 ATGTAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGATGTTGAGCCTTCA 427 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| ||||| || || | ||||| ||||| || || ||||||||| Sbjct 428 GATACCATTGAGAATGTCAAGGCCAAGATCTAGGACAAGGAAGGTATTCCCCCCGATCAA 487 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | |||||| || ||||||||||| | || |||| || ||||| Sbjct 488 CAAAGACTTATCTTCGCCGGAAAGCAATTGGAAGATGGAAGAACACTTTCTGACTACAAT 547 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200 ||||||||||| || || | || ||||| ||| Sbjct 548 ATTCAAAAGGAATCCACTCTCCACTTGGTCTTG 580 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||| | || || || ||||| || || ||||| |||| || | || || ||||| || Sbjct 140 ATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGACGTTGAACCCTCA 199 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || |||||||| ||||| || || ||||||||| Sbjct 200 GACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTATCCCTCCCGATCAA 259 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||| || | |||||| | || | ||| |||||| Sbjct 260 CAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCTCAGCGACTACAAC 319 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||||| || || || | || |||||| Sbjct 320 ATCCAAAAAGAATCAACTCTTCACTTGGTT 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434780362336320