Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq19711 132 3e-26 seq20137 98.7 7e-16 seq5918 93.3 3e-14 >seq19711 Length=592 Score = 132 bits (146), Expect = 3e-26 Identities = 174/240 (73%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 23599 TAATTACTTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 |||| ||||||| ||| | || |||||||||||||| || || ||||| ||||| | || Sbjct 127 TAATCACTTAAAGATGTAAATCTTCGTTAAAACCCTTACTGGCAAAACTATCACCTTGGA 186 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 ||||| || | ||||| |||||| | || || || ||||| |||||| | Sbjct 187 CGTTGAACCCTCAGACACCATTGAAAACGTGAAGGCTAAGATCCAAGACAAGGAAGGTAT 246 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || || ||||||||| | | || || || || ||| |||| ||||||| | | ||| | Sbjct 247 CCCTCCCGATCAACAGAGACTCATCTTCGCTGGAAAATAACTCGAAGACGGAAGAACTCT 306 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| |||||||| |||||||| || || | || || ||| | || ||| ||||||| Sbjct 307 CAGCGACTACAACATCCAAAAAGAATCAACTCTTCACTTGGTTCTTAGATTGAGAGGAGG 366 >seq20137 Length=989 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||| |||||||| || ||||| ||||| | || ||||| || | Sbjct 392 ATGCAAATCTTTGTTAAGACCCTCACTGGTAAAACCATCACCTTAGATGTTGAGCCCTCT 333 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| |||| | || | || ||||||||||| | || || ||||| Sbjct 332 GACACAATCGAGAATGTTAAGGCCAAGATTTAG-GACAAAGAAGGAATTCCCCCCGATCA 274 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 | || | | || || || || ||||| || ||||| | | || ||| || ||||| Sbjct 273 ATAGAGACTTATCTTCGCTGGTAAACAGCTAGAAGATGGTAGAACCTTATCTGACTACAA 214 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||| ||||| ||||| || | || || || ||||| Sbjct 213 CATTCAAAAGGAGTCAACCCTCCACTTGGTCTTAAG 178 >seq5918 Length=2920 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 ||||||| |||| ||||| || || | ||||| || ||||| ||||| || ||||| | Sbjct 2822 TAAAATGTAGATATTCGTCAAGACTTTGACGGGCAAGACGATTACTCTAGACGTTGAACC 2763 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | | ||||| | || | | || || ||| ||||||||||| | || || || Sbjct 2762 CTCTGACACCATAGAGAACGTGAAGGCCAAGATTCAAGACAAAGAAGGAATCCCCCCTGA 2703 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||||| | | || ||||| || || || ||||||| | | | || || || || Sbjct 2702 TCAACAGAGACTGATCTTTGCAGGAAAGTAATTGGAAGATGGAAGAACCTTGTCTGACTA 2643 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||| || ||||| || ||||| | ||||| || || || Sbjct 2642 CAATATCCAAAAGGAATCCACTCTCCATTTGGTCTTGAG 2604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337905001978628