Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq16451 322 7e-83 seq6480 284 2e-71 seq5752 134 2e-26 seq10356 95.1 2e-14 >seq16451 Length=2876 Score = 322 bits (356), Expect = 7e-83 Identities = 983/1495 (66%), Gaps = 37/1495 (2%) Strand=Plus/Plus Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 || || |||| |||||||||| || || | |||| || || || || | || ||| Sbjct 713 AACTCACCAGCTAATACTCTTCTGGTATATACATTAGATGTGTAGGGCTCAAAAGTCTCA 772 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 || || || ||||||| | || || ||||| |||||||| || | || | |||| Sbjct 773 TTATTACCTAAAATTTATGATGTGGATGCAGTGGGCATAGGGGCTAATAAAAGTGAATTT 832 Query 75845 CTGAGACCATGTGTTCTGA--TTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902 || ||| | | ||| | |||||| || | || |||||| | |||||| Sbjct 833 CTAGCACCGTACTTCATGACATCTTATCTC--AGTTTTTCCCAATCATATCTATCTGAGC 890 Query 75903 -GTACAACAT--CCCAGAGATCGTATTGTAGAATT--CCGTTGCTAGCATATGATCCATT 75957 | | | | |||| | |||| ||| |||||| || || | ||| || | Sbjct 891 AGGGCTTCTTGTCCCATAAATCGAATT--AGAATTTTCCTTTAGAAAGTGGTGAACCTTC 948 Query 75958 ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCG 76015 | | ||||||||| ||| || || ||| ||||| ||| || || | ||| | Sbjct 949 AAAACTTTCGTAAGCCCCATCTTTCATAGCGAGTTCT--ACTGAAGCTTCCATAGCAGCA 1006 Query 76016 TAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTT-GCGCTTCAAGACTATCAAAAGG 76074 | |||||| || || |||||| ||| ||| | |||| | | || || ||||| || Sbjct 1007 TGATAAATAGTCTCAAAAATCATCTCATTCA-ATCTAAGAGATTATGGATCTTCAAATGG 1065 Query 76075 ATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATG 76134 ||| | | ||| || |||||||| | || | ||| ||||||||||| |||||||| Sbjct 1066 ATATTTAAGAAGTTAAAGAGCATCTGCAAAACCTTAAACACCAATACCAATGGGTCTATG 1125 Query 76135 TCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194 | | ||| ||| | ||||||| || |||||||||||| |||| || || || || Sbjct 1126 TTTAAGATTTGAATATCTTGCTTCTGAAACTGGGTAATAATTATTATCAATTATCTTGTT 1185 Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA-- 76252 | ||| | || | ||| || || | | || | | ||| ||| | | Sbjct 1186 TAAATTCTTAGTAATTCTTTTGGTAACATCATGCAACTTCTCATAGTCATATTCTTTAGT 1245 Query 76253 -TCTATC---ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATT 76308 ||| | |||||| | || | ||||| || ||||||||||| || ||||| |||| Sbjct 1246 TTCTGTTTTTACAAACCTGTTTAAGGCTATTGAGGCTAGATTACATACAGCTACTTCATC 1305 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 | | | ||||| || || || || || ||||| || || || || || || Sbjct 1306 TGGGCTAGTATATTCTACAATTTCAGTACAGAGATTTGAACTTTTTATGCACCCCAGGTT 1365 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 ||||| || ||| ||||||| | || || || || | | | ||||||||||| || Sbjct 1366 TTGTTAATTAGATTTTCTGTTACAAGTATCTTTGTATAGCATATATGGAGTTCCAGTCTC 1425 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCG 76488 ||| || ||||| | ||| | |||| | |||||| ||||| | ||| | | Sbjct 1426 AATTTGAGATTCTACAATCTAGCTCCATAACCATCTAGCCTTTATAGT--CTTTCTGCCT 1483 Query 76489 CTTCTCTCT--TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACAT-CATC 76545 |||| |||| |||||||| | ||| | || ||||| ||||||| | ||| | Sbjct 1484 CTTCCCTCTTCTTCATATTTTTCATAAAGTTTCTCGAATTCTTCTCCCC-AGCATGTAGT 1542 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 |||||| || || ||||| |||||||| | | ||| || ||| | | || | ||| Sbjct 1543 CAAACCTGGGCACTCATTAGGACACATTAGAGTCCATTCTTCATTCTTTTCGACTCTTTT 1602 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||| ||||| || ||||| || ||| |||||||||| || |||| |||||| || Sbjct 1603 CATAAAAAGATCTGGGATCCAGAGTGCATAGAATAGATCTCTGGCTCTATTTTCTTCTTT 1662 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || ||||||| |||| | ||||| || |||||||| |||||| ||||||| ||| Sbjct 1663 GCCATGATTCTTTCTAAGTTAAAGGAAGTCATAAATATCAGCATGCCAAGGTTCTACATA 1722 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 | || | | || || || |||||| ||||| | ||| || ||||||| ||| Sbjct 1723 GACAGCAAATGCTCCTTTTCTCTTTCCACCTCCTTGATCAACATACCTAGCAGTGTCATT 1782 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 | ||||| | | ||| |||| || ||||| | ||| || ||||| ||||||| Sbjct 1783 AAAAACTTTAAGCATAGGAACAAGTCCGTTTGCATAACCGTTAGTTCCTCTAATATAAGA 1842 Query 76846 TCCACATGCACGAATATTACTAATA--GATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 | ||| | |||| || | | |||| || || || ||||| || ||||| Sbjct 1843 ATCTGCTGCTCTTATAT--CTGAGACTGATACTCCAATGCCACCTGCGGCCTTGGAGATA 1900 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAG 76962 | |||| || | ||| ||| |||| || |||| | ||| || |||| ||||| Sbjct 1901 ACAGCAATTTACTTGAGTGTTTCAAAGATACCTTCTACAGAATCTTCTTTCATAGTTAA- 1959 Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 || ||||| | ||| | | | | || ||||| || || | |||||||| || Sbjct 1960 TAGGAAACAAGAACTCATCTAAGGTTTTGGGGTACCTGCGTTGAAAAGTGTAGGAGTAGC 2019 Query 77023 ATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCA 77082 ||||||||||||| || | | || || ||| ||||||| | | ||||| | ||| Sbjct 2020 ATGAGTGAACCATAATTGACTCATTAAATCGTAGGTTTCAAAAGCCGCTTCAAGATCATC 2079 Query 77083 TTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTA-T 77141 || || || || | | || | ||| | ||| || ||||||| ||||| | | ||| | Sbjct 2080 TTTTTGGATGCCAATACTTACTCTCATAAGCATGTGTTGAGGTCTTTCTATAATTTTAGT 2139 Query 77142 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 | | |||| || | || | | |||| | |||| |||||||||| || | ||| Sbjct 2140 TCCCTCTTTT-AAAAGATAAGCTCTTTCTAGAGTTCTAAAACCAAAGTAATCGTA 2193 >seq6480 Length=2904 Score = 284 bits (314), Expect = 2e-71 Identities = 616/917 (67%), Gaps = 6/917 (1%) Strand=Plus/Minus Query 76277 ATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTG 76336 || ||||||| ||| || || |||||||||| | | ||||| || ||||| Sbjct 1627 ATTGATGCTAAATTGCATACAGCTACCTCATCTGGGGAAGTATATTCAATGATCTCACAA 1568 Query 76337 CATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA-CATGA 76395 || || ||| | |||||| ||||||||||| | || || || || |||| ||||| Sbjct 1567 CAAAGGTTAGAGCTCTTGATGGTTCCAAGATTCTTTTAATTACTTTTACTGTTGGCATGA 1508 Query 76396 GTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCA 76455 || || ||||| | | ||||||||||||||||| | ||| ||||||| || ||| Sbjct 1507 -TCTTTGTAAAGCATGTATGGAGTTCCAGTTTCAATTTAGCTTTCAATAATAGCTTCCCA 1449 Query 76456 GACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTT--TCATATTGTGTATAT 76513 | | |||||| || | ||| | || | | ||||| || ||| || ||| Sbjct 1448 AAGTTTTTGAGCTTTAATAGTT--TTTCTGCCGATACCCTCTTGTTCGTATCTAGTGTAT 1391 Query 76514 AACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATC 76573 | | | || || ||||| || ||| ||||| |||||| || || | Sbjct 1390 AGCTTAACGAACTCTTCTCCGTGGACCTCAAATAAACCCTTGGCTTCATTGGGGCAGAAT 1331 Query 76574 AATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCA 76633 || | ||| || |||| || | || | || ||||||||||||||| | ||| | |||| Sbjct 1330 AAGGTCCAGTCTCCATTATCTCTTACTCTTTCCATAAAGAGATCAGGAACCCACAAAGCA 1271 Query 76634 ATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAAC 76693 | || ||||||| | ||| |||| || || || ||| || || | |||||| Sbjct 1270 AAGAAAAGATCTCTTGCTCTTTGTTCCTCTTTACCGTGATTTTTACGGAGCTATAGGAAA 1211 Query 76694 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTA 76753 || | || |||| ||||||||||||| ||| || || | | || || ||| | Sbjct 1210 TCAAAGATGTCAGCGTGCCATGGTTCTAAATAGATGGCGAAAGATCCTTTTCTCTTACCA 1151 Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||||| ||| | |||||| | ||| | ||||||| ||| || | || ||| Sbjct 1150 CCACCTTGATCTACATAACGGGCAGTTTCATTGAAGACTCTCAGCATGGGTACAAGGCCA 1091 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 ||||| ||| |||||||| || || |||| || | ||| ||| || || Sbjct 1090 TTAGAATGACCGTTTGTTCCCTTGATGTAGGATCCAGTAGCTCTAATGTTATGAACAGCA 1031 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 || || | |||||| || | |||||||| ||||| ||||| || ||||| || Sbjct 1030 AGTCCAACTCCTCCAGCACTCTTAGAGATAAGAGCGATATTCTTCAAAGTATCATATATA 971 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993 ||| || ||||||| |||| | || | |||||||| ||||||| | | | | Sbjct 970 CCCATAATTGAATCATCCTTCATCATGAGCAAGAAACAGCTGCTCATTTGAGGTTTAGGA 911 Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||| |||||||| | ||||||| || |||||||||||| | ||| | || || Sbjct 910 GTTCCGGCATTAAATAGAGTAGGAGTAGCGTGAGTGAACCATCTATCACTCATAAGGTTA 851 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| | | || ||||| || |||||| || || | ||||||| | | Sbjct 850 TATGTTTCAATTGCAGAATCAATATCTTCTTTATGAATACCGACTGAAACACGCAAGAGC 791 Query 77114 ATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA 77173 || | ||||||| || || | || ||| || || | || || ||| |||| ||| Sbjct 790 ATTTATTGAGGTCTCTCAGCAATTTTGCCATTAATCTTAAGTAAATAAGATCTTTCTAAA 731 Query 77174 GTTTTAAAACCAAAATA 77190 |||||||| ||||| || Sbjct 730 GTTTTAAAGCCAAAGTA 714 >seq5752 Length=1520 Score = 134 bits (148), Expect = 2e-26 Identities = 392/600 (65%), Gaps = 8/600 (1%) Strand=Plus/Plus Query 46629 ACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 46688 ||| || |||||| || | ||| ||||| | | || | || || || || ||||| Sbjct 511 ACAAGCGAAATCAGTGTGCATGCCCTCATCACGAGAGATAAGCTCATTTGAGAAAGTGAG 570 Query 46689 CCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAA 46748 || ||||| || ||||||||||| ||||| || || | |||||| || |||||||| Sbjct 571 GCCTGGCATGAGACCACGCTTTTTTAGCCAGAAGATTGAGCAGAAAGACCCTGAAAAGAA 630 Query 46749 TATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAAT 46808 || ||||| | ||| ||||| || || ||||| || | || || || | || Sbjct 631 AATTCCTTCAATAGCAGCGAAAGCAACGAGTCTTTCAGCATAGCTATTGTCTGAACTGAT 690 Query 46809 CCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 ||| || ||||| ||||| || || | ||| || || ||||| || || Sbjct 691 CCATCTCATTGCCCATTCAGCTTTCTTAGTAACAACTGGGATAAAGGAGATAGCTTTGAA 750 Query 46869 GAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTC 46928 ||| | | || || | || ||| | ||||| || | ||| ||| | || Sbjct 751 GAGCATATCCTTCTCCTAGGCGTCGCTAATAAGGGTATCAATAAGGAGAGAATAGGTCTC 810 Query 46929 TGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTG 46988 ||| |||||||| || || ||| | |||||| || || || | |||||||| | | Sbjct 811 TGAGTGAATGTTCTCCATCATCATTTAAAATCCATAGAAGCAACGTGCTTCAGGGACTTA 870 Query 46989 TACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAA 47048 | || || || |||| || || |||||||||| || || || |||||||| || || Sbjct 871 GATTTCAGTGCAGAATCTTTGAGCCAAATTCTCAACTACAATACCGTCACTAGCTGCGAA 930 Query 47049 AAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCGGTAGTCAGTTTATTCCAGTC 47105 || || | || || ||||| || | || | |||| | ||| | | ||| || Sbjct 931 GAAAGCTAGAACGTGCTTAATGAAGTGGCGTTCGTTATCG---TTGAGTCTCTCCCAATC 987 Query 47106 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC-TCTGCTTTTT 47164 || | ||| | | | ||| | ||||| || |||||||||| ||| |||| | | Sbjct 988 TTTAACATCAGTGGCGAGATCGATCTCTTCTGCAGTCCAGAATGCTGCCATCTG-ATCCT 1046 Query 47165 TATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 | ||||| ||||| || || || ||| || | ||| || ||||| || || |||| Sbjct 1047 TGTACATTTTCCAGATGTCGTTGTACCTGATAGGTAGAATGACGAATCTGTTAGGGTTTT 1106 >seq10356 Length=2916 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 75690 TTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAG 75749 ||||| | ||| || ||||| |||||| |||||| |||| | ||||||| | Sbjct 2211 TTAAATCATTAACAAGGTGAGGGTTAACACAGACAAATTCACCAGCAAGAACTCTTCTTG 2152 Query 75750 TGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTG 75809 |||| | |||| |||||| ||||| | | ||||||||||| | ||||||| ||||| Sbjct 2151 TGTAGACATTAGAGGTATAAGGTTCGAATGCCTCATTGTTTCCAAGGATTTGAGAAGTTG 2092 Query 75810 AAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCAT 75854 | || || |||||||| || ||||| | | |||||| ||||| Sbjct 2091 AGGCTGTTGGCATAGGAGCAACCAAGAGAGAATTTCTTGCACCAT 2047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712708123533120