Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq20137 120 7e-22 seq19711 116 9e-21 seq20138 113 1e-19 >seq20137 Length=989 Score = 120 bits (132), Expect = 7e-22 Identities = 169/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 |||||||| | ||| | || || || ||||| ||||| |||||||| || | ||| ||| Sbjct 172 CTGAGTCTTAAGACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGATAAGGTT 231 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||||||||| ||| || ||||||||||| |||| || || | | |||||| Sbjct 232 CTACCATCTTCTAGCTGTTTACCAGCGAAGATAAGTCTCTATTGATCGGGGGGAATTCCT 291 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || || | ||| || || ||| |||| | |||| || ||| || || | Sbjct 292 TCTTTGTCCTAAATCTTGGCCTTAACATTCTCGATTGTGTCAGAGGGCTCAACATCTAAG 351 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC-CTTACTCT 152118 || || ||||| || ||||| ||||| || |||| ||||| ||| |||| ||| Sbjct 352 GTGATGGTTTTACCAGTGAGGGTCTTAACAAAGATTTGCATACCACCTCTTAGTCT 407 Score = 113 bits (124), Expect = 1e-19 Identities = 160/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||||||||| | |||||||| || ||||| | |||||| || || | | ||| Sbjct 400 CTTAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTCTAGATGTTATAGTCAGAGAGGGTT 459 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || ||||| || || ||||| |||||||| || | ||||| || || | | ||| | Sbjct 460 CTTCCATCCTCAAGTTGCTTT--CCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATAC 517 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || |||| || || |||||| | || | | |||| | ||| || |||| Sbjct 518 CTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAA 577 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| || || || | |||||| ||||||| || ||| Sbjct 578 GAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 620 Score = 111 bits (122), Expect = 4e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | ||||| || || ||||| ||||| |||||||| | || ||| Sbjct 628 CTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGATAGGGTT 687 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||||| || || || ||||| || |||| || || | | ||| || Sbjct 688 CTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGGATACCC 747 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || ||||| |||| | |||| || |||||| || ||| Sbjct 748 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACATCGAGA 807 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||| || || || || || || ||||||| | |||||| Sbjct 808 GTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 851 >seq19711 Length=592 Score = 116 bits (128), Expect = 9e-21 Identities = 147/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || ||||||||||||||||| ||| | |||||| || ||||| | Sbjct 346 CAAG-TGAAGAGTTGATTCTTTTTGGATGTTGTAGTCGCTGAGAGTTCTTCCGTCTTCGA 288 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || |||||||| || ||||| || || | | ||| |||||||| ||||| | Sbjct 287 GTTATTTTCCAGCGAAGATGAGTCTCTGTTGATCGGGAGGGATACCTTCCTTGTCTTGGA 228 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | ||||||| || || || | || |||||||||| Sbjct 227 TCTTAGCCTTCACGTTTTCAATGGTGTCTGAGGGTTCAACGTCCAAGGTGATAGTTTTGC 168 Query 152077 CCGTGAGAGTCTTCACGAAGA 152097 | || || || || ||||||| Sbjct 167 CAGTAAGGGTTTTAACGAAGA 147 Score = 109 bits (120), Expect = 1e-18 Identities = 155/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | || ||||| || || ||||| || ||||| || | | ||| Sbjct 588 CTAAGTCTCAAGACCAAGTGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAAAGTGTT 529 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || |||||||| | ||||| |||||||||||||| || || || || | | || | Sbjct 528 CTTCCATCTTCCAATTGCTTT--CCGGCGAAGATAAGTCTTTGTTGATCGGGGGGAATAC 471 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 ||||||| || | || || |||||| |||| | | | |||||| ||| || || | Sbjct 470 CTTCCTTGTCCTAGATCTTGGCCTTGACATTCTCAATGGTATCTGAAGGCTCAACATCGA 411 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGA 152097 | || || || ||||| ||||| ||||| ||||||| Sbjct 410 GGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGA 375 >seq20138 Length=732 Score = 113 bits (124), Expect = 1e-19 Identities = 160/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||||||||| || | || || || ||||| ||||| |||||||| || | | ||| Sbjct 143 CTGAGTCTGAGAACCAAGTGGAGGGTTGACTCCTTTTGAATGTTGTAGTCAGAAAGGGTT 202 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 || ||||| || || ||||| |||||||| || | ||||| || || | | ||| | Sbjct 203 CTTCCATCCTCAAGTTGCTTT--CCGGCGAAAATCAATCTCTGTTGATCGGGTGGGATAC 260 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAA 152061 |||| || |||| || || |||||| | || | | |||| | ||| || |||| Sbjct 261 CTTCTTTATCTTAGATCTTAGCCTTGACATTTTCAATGGTGTCACTAGGCTCAACGTCAA 320 Query 152062 GAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| || || || | |||||| ||||||| || ||| Sbjct 321 GAGTGATAGTCTTTCCAGTCAAAGTCTTAACGAAGATCTACAT 363 Score = 111 bits (122), Expect = 4e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || ||||| | ||| | ||||| || || ||||| ||||| |||||||| | || ||| Sbjct 371 CTAAGTCTCAAGACCAAGTGAAGGGTTGATTCTTTCTGGATATTGTAATCAGATAGGGTT 430 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || || ||||||| || || || ||||| || |||| || || | | ||| || Sbjct 431 CTGCCGTCTTCTAATTACTTTCCAGCAAAGATGAGTCTCTATTGATCAGGTGGGATACCC 490 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || ||||| |||| | |||| || |||||| || ||| Sbjct 491 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATAGTGTCAGATGGCTCTACATCGAGA 550 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||| || || || || || || ||||||| | |||||| Sbjct 551 GTAATAGTCTTTCCGGTAAGTGTTTTTACGAAGATTTACATTTT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153445436493361