Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraurostyla_20sp._20PUJRC_5FG6_20[genbank_20GCA_5F001272965.2_20201 5-12-23] 25,391 sequences; 57,107,439 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5918 152 1e-31 seq20138 138 2e-27 seq20137 131 4e-25 seq19711 122 2e-22 >seq5918 Length=2920 Score = 152 bits (168), Expect = 1e-31 Identities = 163/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| ||| | ||| ||| |||||||| |||||||||| |||| || | ||||| || Sbjct 2610 ACCAAATGGAGAGTGGATTCCTTTTGGATATTGTAGTCAGACAAG-GTTCTTCCATCTTC 2668 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || |||||||||| | ||||| ||| || || || || |||||||| Sbjct 2669 CAATTACTTTCCTGCAAAGATCAGTCTCTGTTGATCAGGGGGGATTCCTTCTTTGTCTTG 2728 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| || || ||| | || || ||||| || | ||| || || ||||| |||||||| Sbjct 2729 AATCTTGGCCTTCACGTTCTCTATGGTGTCAGAGGGTTCAACGTCTAGAGTAATCGTCTT 2788 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||||||||| |||||||||| |||||| Sbjct 2789 GCCCGTCAAAGTCTTGACGAATATCTACATTTT 2821 >seq20138 Length=732 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| ||| || | |||||||| ||||| || ||||| || Sbjct 173 TCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAAA 232 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||||| || || ||||| || || |||| |||||| || || || | Sbjct 233 ATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTAGATCTTAGCCTTGACATTT 292 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || || || || |||||||| ||||| || ||||||||||||||| Sbjct 293 TCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACG 352 Query 283089 AATATCTGCAT 283099 || |||| ||| Sbjct 353 AAGATCTACAT 363 Score = 127 bits (140), Expect = 4e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| ||||| ||||| |||| || || | ||| || |||| || || || ||||| Sbjct 400 TTCTTTCTGGATATTGTAATCAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAA 459 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | | ||| ||| || ||||||||||||||||||||||| || || ||| | Sbjct 460 GATGAGTCTCTATTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 519 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || || |||||||| || ||||| || || | || || || Sbjct 520 CTCAATAGTGTCAGATGGCTCTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTAC 579 Query 283088 GAATATCTGCATTTT 283102 ||| || | |||||| Sbjct 580 GAAGATTTACATTTT 594 >seq20137 Length=989 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| | |||||| ||||||| || || | |||||||| ||||| || ||||| || Sbjct 429 TTCTTTCTAGATGTTATAGTCAGAGAGGGTTCTTCCATCCTCAAGTTGCTTTCCGGCGAA 488 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||| || || ||||| || || |||| |||||| || || || | Sbjct 489 AATCAATCTCTGTTGATCGGGTGGGATACCTTCTTTATCTTAGATCTTAGCCTTGACATT 548 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || || || || |||||||| ||||| || |||||||||||||| Sbjct 549 TTCAATGGTGTCACTAGGCTCAACGTCAAGAGTGATAGTCTTTCCAGTCAAAGTCTTAAC 608 Query 283088 GAATATCTGCAT 283099 ||| |||| ||| Sbjct 609 GAAGATCTACAT 620 Score = 127 bits (140), Expect = 4e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| ||||| ||||| |||| || || | ||| || |||| || || || ||||| Sbjct 657 TTCTTTCTGGATATTGTAATCAGATAGGGTTCTGCCGTCTTCTAATTACTTTCCAGCAAA 716 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | | ||| ||| || ||||||||||||||||||||||| || || ||| | Sbjct 717 GATGAGTCTCTATTGATCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 776 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| || | || || |||||||| || ||||| || || | || || || Sbjct 777 CTCAATAGTGTCAGATGGCTCTACATCGAGAGTAATAGTCTTTCCGGTAAGTGTTTTTAC 836 Query 283088 GAATATCTGCATTTT 283102 ||| || | |||||| Sbjct 837 GAAGATTTACATTTT 851 Score = 93.3 bits (102), Expect = 9e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || | ||||| ||||| ||||| || || ||| Sbjct 202 TCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCTAGCTGTTTACCAGCGAAG 261 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | | | ||| || ||||| || || ||||| | ||||| || || || | Sbjct 262 ATAAGTCTCTATTGATCGGGGGGAATTCCTTCTTTGTCCTAAATCTTGGCCTTAACATTC 321 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | || || || | ||||| || ||||| || | |||||||| Sbjct 322 TCGATTGTGTCAGAGGGCTCAACATCTAAGGTGATGGTTTTACCAGTGAGGGTCTTAACA 381 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 382 AAGATTTGCAT 392 >seq19711 Length=592 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| || |||||||||| ||| || | ||||| || | ||| || ||||| || Sbjct 559 TTCCTTTTGAATATTGTAGTCAGAAAGTGTTCTTCCATCTTCCAATTGCTTTCCGGCGAA 500 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | |||||| || |||||||| |||||||| | |||||| || || || | Sbjct 499 GATAAGTCTTTGTTGATCGGGGGGAATACCTTCCTTGTCCTAGATCTTGGCCTTGACATT 440 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || || || |||| || || ||||| ||||| ||||| || || | |||||||| Sbjct 439 CTCAATGGTATCTGAAGGCTCAACATCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 380 Query 283088 GAATATCTGCAT 283099 ||| || | ||| Sbjct 379 GAAGATTTACAT 368 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||||||||||||||||||||| || || | || || || |||| ||| || || || Sbjct 331 TTCTTTTTGGATGTTGTAGTCGCTGAGAGTTCTTCCGTCTTCGAGTTATTTTCCAGCGAA 272 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | | ||||| || || ||||| ||||||||||||||||| || || ||| | Sbjct 271 GATGAGTCTCTGTTGATCGGGAGGGATACCTTCCTTGTCTTGGATCTTAGCCTTCACGTT 212 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| || | ||| || || | ||||| || || || || | || ||||| Sbjct 211 TTCAATGGTGTCTGAGGGTTCAACGTCCAAGGTGATAGTTTTGCCAGTAAGGGTTTTAAC 152 Query 283088 GAATATCTGCATTTT 283102 ||| || | ||| || Sbjct 151 GAAGATTTACATCTT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046398672513714