Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4931 82.4 6e-11 >seq4931 Length=1290 Score = 82.4 bits (90), Expect = 6e-11 Identities = 122/168 (73%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 15209 TCTTCTAATTGTTTGCCAGCGTATA-TCAAACGTTGTT-GGTCGTTTGGAATTCCTTCTT 15266 |||||||||||||| ||||| | | | | ||||| |||| |||||||||| || Sbjct 1289 TCTTCTAATTGTTTTCCAGCAAAAAATTAGTTTTTGTTTGGTCAGGGGGAATTCCTTTTT 1230 Query 15267 TGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTA 15325 | || |||||| ||| || ||| |||| || |||||| ||| ||||| | || Sbjct 1229 TATCTTGAATTTTTGCT-TTAACATTTTCAATAGTATCGGATGGTTCAACATCAAGAGTG 1171 Query 15326 ATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAAT 15373 || ||||| || || | ||||||||||| |||||||| || | |||| Sbjct 1170 ATTGTTTTTCCGGTTAATGTTTTTACAAAGATTTGCATTTTCGTAAAT 1123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362146187252739