Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4931 86.0 6e-12 >seq4931 Length=1290 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 ||||||||| | ||||||||||||||||| |||||| | ||||| | || | ||| || Sbjct 1130 AAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCA 1189 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 ||| || || || | || ||| ||| ||| || ||| |||| || || || || Sbjct 1190 TCCGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAAAAGGAATTCCCCCTGAC 1249 Query 26886 C-AACAAAGACTCATTTACGGC-GGCAAACAACTCGAAGAT 26924 | |||||| ||| |||| || || |||||| | |||||| Sbjct 1250 CAAACAAAAACTAATTTTTTGCTGGAAAACAATTAGAAGAT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478617651048880