Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq4931 111 1e-19 >seq4931 Length=1290 Score = 111 bits (122), Expect = 1e-19 Identities = 131/175 (75%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 22202 TTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTC 22261 ||| ||||||| || |||||||| ||||| ||||| |||||||| ||||| |||||| Sbjct 1116 TTTTTACATTTACGAAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTC 1175 Query 22262 TTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGG 22321 |||| || ||| | ||||||| | || || | ||| |||||||||||| || | | Sbjct 1176 TTGATGTTGAACCATCCGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAAAAG 1235 Query 22322 GTATTCCACCCGATC-AACAACGTCTTA-TATTTGCCGGCAAACAGTTAGAGGAT 22374 | ||||| || || | ||||| || | | ||||| || ||||| ||||| ||| Sbjct 1236 GAATTCCCCCTGACCAAACAAAAACTAATTTTTTGCTGGAAAACAATTAGAAGAT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419689741661635