Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3938 416 4e-111 seq2202 233 2e-56 seq2267 150 2e-31 seq7238 145 1e-29 seq1451 114 2e-20 seq3191 96.9 4e-15 seq4454 87.8 2e-12 seq7405 82.4 1e-10 seq2835 82.4 1e-10 >seq3938 Length=9879 Score = 416 bits (460), Expect = 4e-111 Identities = 1094/1653 (66%), Gaps = 40/1653 (2%) Strand=Plus/Minus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTC 6576 ||| || || ||||| || | ||| | || || | |||| || | ||||||||| Sbjct 4293 ATAGCAATAATTTTCAAGGCTATTTCTGGCTTCAATTCTTTTTTTGTTTTCTTCATCTTC 4234 Query 6577 ATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCC 6636 ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| || Sbjct 4233 TGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGGGATAATCTACC 4174 Query 6637 CTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 |||||||| ||||| ||||| | ||| | |||||| | || || |||| | Sbjct 4173 TTTATCATTAGTAATTGTAATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCTGTG 4116 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 ||||| ||||||||||||||||||| ||| || | || | |||||||||| || Sbjct 4115 ACATTTAAAATACCATTTGCATCAATATCAAAAGTAACTTCAATTTGTGGTACTTTTCTA 4056 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTT- 6813 || || | |||||| || ||||| |||| | || | |||| | ||||| | | || Sbjct 4055 GGAGCAGGTGGAATTCCATCTAAATGAAATTTTCCTAATAAATTATTATCTTTTG--TTA 3998 Query 6814 ---CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGT 6870 || | ||| |||||||| |||| ||| || | ||||| ||||| || Sbjct 3997 AAGCT--CTTTCCCCTTCATATACTTGTATTAATACACCTGGTTGGTTATCAGCATATGT 3940 Query 6871 TGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCAT 6930 || || ||||| ||| |||| ||| || || |||||||| ||| | ||||| Sbjct 3939 TGTAAATATTTGGCTTTTTTTAGCTGGGATTGTTGTATTTCTTTCAATTAATTTAGTCAT 3880 Query 6931 AATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC 6990 || |||||| |||||| | ||| | ||||| | || || || | ||| | || Sbjct 3879 AACACCACCTGCAGTTTCTAATCCTAAAGACAAGGAACATACATCTAATAATAATAAATC 3820 Query 6991 TTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATG 7049 ||| || | ||| | | | | || | ||| || || ||||| || | || || |||| Sbjct 3819 TTGTACTGCATTTGATTGAT-CTCCAGATAATATAGCAGCTTGAACAGCAGCACCATATG 3761 Query 7050 CGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATA 7109 | || || ||||| || || || | | || |||||| || ||||| | || || Sbjct 3760 CAACAGCTTCATCAGGATTTATTGATCTACATGCTTCTTTTCCATTAAAGAATTCTTTTA 3701 Query 7110 ACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTT 7169 | | ||| ||||| || |||| ||| || ||||| || || || | ||||| || Sbjct 3700 TTAATGTTTGGATTTTTGGAATTCTTGTTGAACCACCAACTAATACAACTTCATGAACAC 3641 Query 7170 TCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGA 7229 || |||||| ||| | | ||| | |||||| |||||| | | | | | Sbjct 3640 TCTTTTTATCCATCATAGCATCTTTTAAAACTTTTTCAACAGGTATTAAAGTGTCTCTAA 3581 Query 7230 ACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA----AATCA 7285 | | || ||||| | ||| ||||| | || | || | ||| | | ||||| Sbjct 3580 AATAATCAATACATAATTCTTCAAATCTAGCTC---TACTTACAGTA-ACACTATAATCA 3525 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || || | | || |||||||||||||| | ||||| | |||||||| || || Sbjct 3524 ATACCTTCAAAAAGGGAGTCAATTTCAATGGTAGCTTGTGTAGAAGAAGATAATGTACGT 3465 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 ||||| | || || |||| ||| | | | || | || || | |||| Sbjct 3464 TTTGCTCTTTCGCATTGTGTTCTTAATCTTCTTAATGCTCTACTATTTTTTGATAAATCT 3405 Query 7406 TT--CT-TATGTTTACGTTTAAACTCTTCAG----AGAAGTGTCGAAG-GAGTCTCGAAT 7457 || || ||| ||| | |||||| |||||| | || | | || || | || Sbjct 3404 TTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAATTTACTAAACGATT-----AT 3350 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | |||||||||||||| || || ||||| || || || || || |||||||| ||||| Sbjct 3349 CAAAATCTTCACCACCTAAATGGGTATCACCTGCTGTTGCCTTAACTTCAAAAATACCAT 3290 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 ||||||| | | || ||||||||||| |||||||| || | || ||||| | | | Sbjct 3289 CTTCAATAGTAAGTAATGAAACATCAAATGTACCACCTCCTAAATCGAAAATTAAAATAT 3230 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | | || |||| | ||| || || ||||| || || |||||||||| Sbjct 3229 TTTTTTCTCCTTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTTGGTTCAT 3170 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | ||||| | | | || | || ||||| || | |||||||| || ||||| | || Sbjct 3169 TTATAATTCTCATAACATTTAACCCTGCAATTGTACCAGCATCTTTTGTTGCTTGCCTTT 3110 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | ||||| ||||| || || || || || | || || | | | || || | | Sbjct 3109 GAGAATCATTAAAATATGCAGGTACTGTAATAACAGCATTTTTTATAGATTTTCCTAAAA 3050 Query 7758 ACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 | | ||| || | ||||||| |||| |||| |||||| || || || ||||||| | Sbjct 3049 AGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGATATTTCTTCAGGATGA 2991 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || |||| |||| || | | || ||||||||||||| || || || || ||| | Sbjct 2990 AATAATTTCTTTTCGCCTTGATAAACAACTTCAATCATTGGCTTTTCTTCAATACCTGAT 2931 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | || || | | ||||| ||||||||| ||| || || | |||||| ||| Sbjct 2930 TTTACTGTAAATGGCCAATGTTTCATATCACTTTGTACAGAAGATTCTGTAAACTTCCTT 2871 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||||||||||| ||||| |||| || ||| | || ||| || || Sbjct 2870 CCAATTAATCTTTTTGCATCAAATACTGTATTTTCTGGATTCCTTGCAACTTGATTTTTA 2811 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || | | ||| | || ||||| || || || |||||||| ||| Sbjct 2810 GCTGCATCTCCAATTAATCTTTC---TGTGTCGGTAAAAGCTACATAGGATGGGGTTGTT 2754 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 | ||| ||||||||||| ||||| || || || || ||| ||| || || || || Sbjct 2753 CTATTACCTTGGTCGTTTGCAATTATATCGACATTTTCATTTCTCCATACACCAACACAG 2694 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||| || || || ||||||||||| || ||| Sbjct 2693 GAATATGTGGTACCCAAATCAATACCTATAGCT 2661 >seq2202 Length=5960 Score = 233 bits (258), Expect = 2e-56 Identities = 813/1246 (65%), Gaps = 47/1246 (4%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 2252 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCATTAATCATTTTTT 2193 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTT 6669 | || | |||||| |||||||| || || ||||| ||||| || || |||| | ||| Sbjct 2192 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTACT--TTT 2135 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 || | | |||||||| || ||||| |||||||||||| ||| ||| || | Sbjct 2134 TCCAGTTCCTTTATCTTCTGCTTCTACATGTAAAATACCATTTTTATCGACAGTAAATGT 2075 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 || | ||||| ||| ||| || |||| | ||| || || | ||| |||||| | || Sbjct 2074 AACTTCAATTTTAGGTACACCTCTTTGTGCTGGTGGTATTCCTGATAATTCAAATTTTCC 2015 Query 6790 AAGTAAACTGTTATCCGTCGCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACC 6847 | |||| ||||| | | || | | ||| |||||| | |||| |||| || Sbjct 2014 TAATAAATGATTATCTTTAG--TTAATGCTCTTTCTCCTTCAAAAACTTGAATTAAAACA 1957 Query 6848 GCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTA 6907 || |||||||||||||| ||||| || ||||| ||| || | ||| || ||| Sbjct 1956 GCTGGTTGATTATCTTGATATGTTGAAAATGTTTGTGATTTTTTTGTTGGGATAACTGTA 1897 Query 6908 TTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGT 6967 ||||| ||| | | ||||||||||| || | |||||| | || | || | || Sbjct 1896 TTTCTTTTAATTAATTGAGTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAATGGA 1837 Query 6968 GTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCG 7027 || || || || | || | ||||| | ||| |||| || | ||| | Sbjct 1836 GTAACATCTAATAATACAACATCTTGTA---ATT------CTTCTCCTAAAATGATACCT 1786 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 ||||| | | || || ||||| || || ||||| || ||||| | |||| ||||| Sbjct 1785 GCTTGAATAGCGGCACCATATGCTACTGCTTCATCTGGATTAATACCTCTATTGGGTTCT 1726 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 ||||| || ||| | || | |||||||| ||||| || || || || || || || Sbjct 1725 TTACCATTGAAAAAGTCTTTAATAATTTGTTGGATTTTAGGTATACGAGTTGAACCTCCT 1666 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGAT-CTTTGAGTC-TCGAAGTGTTTTTT 7205 || ||||| |||||| ||| ||| | ||| | || |||| || || || | ||||| Sbjct 1665 ACTAAAACAATTTCA-TCAATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTT 1608 Query 7206 CGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GG 7264 |||||||| | | || | || || || | | ||| ||||| || | | Sbjct 1607 TAACAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTGGCTCTTG 1548 Query 7265 GTAATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGTTT 7322 ||||| | | | |||| | || || |||| | ||||||||||| |||| | Sbjct 1547 TTAATGTTTCT-GAAAAATTATGTCCTTCAATTATATC--TTCAATTTCAAT--TTGTGT 1493 Query 7323 GTGCCGTCGAA--GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || | || ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 1492 -TGATGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT 1434 Query 7381 GGCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGA 7436 || | ||| | || || |||| | |||| ||| ||||||| | || | | | Sbjct 1433 AGCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAA 1377 Query 7437 AGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 | || | | ||| ||| ||||||||||| || || || |||| || || || | Sbjct 1376 ATAATC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAATGAGTATTTCCTGCTGTTG 1318 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 | | |||||||| | ||| || || ||| | ||||||||||| |||||||| | Sbjct 1317 CATATACTTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAATGTACCACCTC 1258 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 ||| ||| | | | || | || |||| || ||||| | ||| || || | Sbjct 1257 CCAAATCATATACTAATATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTA 1204 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || || ||||||||||||||||| | || | |||||||| | | | Sbjct 1203 AAGCAGCAGCGGTGGGTTCATTAATAATACGTACTATATTTAAACCAGCAATTGCACCAG 1144 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||||| || ||||||| ||| | ||| ||||| || || || || || || || || | Sbjct 1143 CATCTTTTGTAGCTTGTCTTTGTGCATCATTAAAATAAGCAGGTACAGTAACAACAGCAT 1084 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 | ||| ||||| | | | |||| || || ||||||||||| Sbjct 1083 TTTTTACTGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTT 1038 >seq2267 Length=4651 Score = 150 bits (166), Expect = 2e-31 Identities = 1027/1640 (63%), Gaps = 41/1640 (3%) Strand=Plus/Plus Query 104482 ACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTA 104541 ||||| | || || ||||| || || || | ||||| | |||||||| || |||||| Sbjct 2019 ACACCCCGGTCAGCGGCCATGTCAATAATATTCTTTTGCTTGATTTCCCAAACAGTTTTA 2078 Query 104542 TACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTC 104601 |||||||| || | || | ||||| || |||| | ||| ||| ||||| | Sbjct 2079 TACAATTCTTTCAAGTCGTTAGGTATTTCGCTAATATATTGGACACTTCCATTG----TG 2134 Query 104602 ACCA--TAA--GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAA----TCGT 104653 | || ||| | | |||||| || | ||| | || ||| ||||| || | Sbjct 2135 AGCAATTAATTGTTGTTTCATATCTTCATCCCACAAACC----TCTATCAAAAAGATCTT 2190 Query 104654 TTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATAT 104713 ||| ||||| ||||| || | |||||||| | | ||||| | || || | Sbjct 2191 TTAACAAATGAGGATTTACAACAAAGAATTCACCACTTAATACACGTCTATAGTAAATGT 2250 Query 104714 TGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAG 104773 | | ||||| ||||| ||| | || || || || ||||| || || || || || || | Sbjct 2251 TACTTGTATATGGTTCAAAAGATTCATTATTTCCCAAAATTTGTGAAGTTGAAGCTGTTG 2310 Query 104774 GCATAGGTGCAAGAAGAAGACTATT-CATAGTTCCTTT---CTTAACAAGTTTACGCATG 104829 |||||||||| | |||||| ||| | || | | | | |||| ||| || Sbjct 2311 GCATAGGTGCTAAAAGAAGTGAATTTCTTAATCCATGTATGCTTATTTTTTTTTTTAATA 2370 Query 104830 GCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACATATCGAATTGA 104886 || |||||| ||| | | | ||||| | || ||||||||| ||||| Sbjct 2371 A-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACATATCAAATTGT 2423 Query 104887 AGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCA 104946 | || |||| || || |||||| | | |||||| ||||| | | || || Sbjct 2424 AATATTCCTTGGCTTGCTGGACTACCCTTATATGATTCATATGGACCATGTACTTGTGCT 2483 Query 104947 AGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGT 105006 | |||| ||| ||| | | || | || || || || ||||| | || | | Sbjct 2484 AATTCAACAGACATTTCTAAAGCCGCATAATACATTGTCTCAAATATTCTTTTATTTAAT 2543 Query 105007 TTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCC 105066 | | | | ||| || || | ||| |||||| | ||||| || || | || Sbjct 2544 TCTTTAGCTTCGTCAGATTCATATGGATATCTTAAAAGCATAAATGTATCTGCTAATCCT 2603 Query 105067 TGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGG 105126 || || || || || || |||| || | ||||||| || | | || ||||| Sbjct 2604 TGTACTCCTATTCCAATAGGTCGATGCCTTTTATTTGATTTTTCAGCTTCTTTAATTGGG 2663 Query 105127 TAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGT 105186 ||| | ||| | ||||||| || | ||| || | |||| ||||| |||| | || | Sbjct 2664 TAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAGTAATATCATAT 2723 Query 105187 AACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGAT 105246 || | || | ||||| || || || || |||||| |||| ||| || ||||| Sbjct 2724 AATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTACATAATGCAATTGAA 2783 Query 105247 GCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAA 105306 || | |||||| || || ||| || || | || | ||||| ||| || Sbjct 2784 GCCAAATTACAAACAGCTACTTCATCAGGTGAGGTGTATTCAATTATTTCACAACATAAG 2843 Query 105307 TTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTG 105366 || ||||||| || || | | ||| || || || || ||| || || ||||| Sbjct 2844 TTACTACATTTAATTGTTCCTAAATTTTTTTGATTAGATTTAGAATTGCATGCATCTTTA 2903 Query 105367 TAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTGCTTTCCAAATCTC 105425 || | ||||||||| || |||||| |||| || ||||| | || ||| | || Sbjct 2904 TATAACATATATGGTACACCAGTTTCAATTTGACTTTGTAATA-TAGCAAACCATAAATC 2962 Query 105426 CGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTC 105485 || | || ||| || | | | ||| ||| ||||| || | | ||| Sbjct 2963 TTGTGCAAGGACTGTTTTTTTTCCTAAATTTTCTTCTTCATATTTTGTATATAACTTTTC 3022 Query 105486 AAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAAACAATGAC 105543 ||| || | || | || | ||| | | | | || |||||| | || | | Sbjct 3023 AAATTCGTCTCCCCAAGATTCACTTAAACC--TGGACATTCATTAGGACACATTAAAGTC 3080 Query 105544 CAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAG 105603 || || || || || | |||||| || ||||| || | ||| || || |||| Sbjct 3081 CAGTTTTTATTTTCTTTTACTCTTTTCATAAATAAATCAGGTACCCAAATAGCATAAAAT 3140 Query 105604 AGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGA 105663 | |||||| || ||||| | ||| ||||| | | || | ||| || | | Sbjct 3141 AAATCTCGAGCTCTTAATTCTTCTTTACCATGATTTTTTCTTAAATCTAAAAATTCAAAA 3200 Query 105664 ATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---T 105720 ||||| | |||||||| |||| ||| ||||||| ||| ||||| | ||| | | Sbjct 3201 ATATCTGAATGCCATGGCTCTATATATACTGCAAAAGATCCTTTTCTTTTCCCTCCACCT 3260 Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780 |||| ||||| ||||| || ||| | || | ||||||||||| | ||||| ||| Sbjct 3261 TGATCTACATACCTTGCCGTATCATTAAAAACCCTTAACATTGGAACTAAACCATTTGAT 3320 Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC-CC 105839 | ||||| ||||| | ||||| || || | | | || ||| || || | ||| || Sbjct 3321 ATACCATTAGTTCCTCTAATATAAGAATTCTGACCTCTTATATCTTGTACA-GCAACTCC 3379 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || ||||| || ||||| | ||||| ||| || | ||||| || Sbjct 3380 TATGCCGCCTGCTGTTTTACTAATCAAAGCACATTGTTTTAATGTTTCAAATATACCTTC 3439 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 ||| |||| || | | | || ||||| ||||||||||| |||| || || || Sbjct 3440 AATAGAATCTGATTTCATAGATAATAGAAAACAAGATGACATTTGCGGTCGTGGGGTTCC 3499 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || | || ||||| ||||| |||| | || || | | ||||| Sbjct 3500 TGAATTAAATAATGTGGGTGTAGCATGTGTGAAATATTTTTGAGACATTAAATGATATGT 3559 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 ||| | | | |||| ||| | | |||||| ||||| | || | ||| | | || Sbjct 3560 TTCTAAAGCTTTTTCAAGATCATCTATATGAATTCCAATTGACACTCTCATTAATAAATG 3619 Query 106080 TTGGGGTGTTTCAATAATTT 106099 ||| || ||||||||||| Sbjct 3620 TTGAGGACGTTCAATAATTT 3639 >seq7238 Length=1513 Score = 145 bits (160), Expect = 1e-29 Identities = 259/378 (69%), Gaps = 3/378 (1%) Strand=Plus/Minus Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCA 7831 ||||||||||| | |||||| || || || ||||| ||| |||| |||| Sbjct 1483 TCTTTCATTTTTTGTANAACCATAGAAGATATTCTTTCAGGATGAAATAATTTCTTTTCG 1424 Query 7832 CCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGAC 7891 || | | || ||||||||||||| || || || || ||| | | || || | | | Sbjct 1423 CCTTGATAAACAACTTCAATCATTGGCTTTTCTTCAATACCTGATTTTACTGTAAATGGC 1364 Query 7892 CAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTT 7951 |||| ||||||||| ||| || || | |||||| ||||| || | | ||| Sbjct 1363 CAATGTTTCATATCACTTTGTACAGAAGATTCTGTAAACTTCCTTCCAATTAATCTTTTT 1304 Query 7952 GCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATA 8011 |||||||| ||||| |||| || ||| | || ||| || || || || || || || Sbjct 1303 GCATCAAATACTGTATTTTCTGGATTCCTTGCAACTTGATTTTTAGCTGCATCTCCAATT 1244 Query 8012 AGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCG 8071 | | ||| | | | ||||| || || || |||||||| |||| ||| ||||||||| Sbjct 1243 AATCTTTCTGTGT---CGGTAAAAGCTACATAGGATGGGGTTGTTCTATTACCTTGGTCG 1187 Query 8072 TTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCT 8131 || ||||| || || || || ||| ||| || || || || ||||| || || || Sbjct 1186 TTTGCAATTATATCGACATTTTCATTTCTCCATACACCAACACAGGAATATGTGGTACCC 1127 Query 8132 AAATCAATACCGATTGCT 8149 ||||||||||| || ||| Sbjct 1126 AAATCAATACCTATAGCT 1109 >seq1451 Length=6220 Score = 114 bits (126), Expect = 2e-20 Identities = 280/416 (67%), Gaps = 20/416 (5%) Strand=Plus/Minus Query 11280 ATCAAATCTACCGGGGC--GTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 ||||||||| || || | |||||| ||| || | |||||||| | |||||| | Sbjct 1368 ATCAAATCTTCCTGGTCTTGTAATA--GCAGGATCAAA-ATATCGATTCTATTTGTTCCT 1312 Query 11338 CCTATAACAACAATTTCAG--TTTCAT-TCTCGAAACCATCCATTTCTGTTAATAATTGG 11394 ||| |||||| | || | || || | | ||| |||||||||||| | | ||| Sbjct 1311 GCTAAAACAACTACTTGATCATTAGATGTATGGAACCCATCCATTTCTACAAGCATCTGG 1252 Query 11395 TTAATTGTTTGTTCACGCTCATCGTTTGCC------GCAAACCCATTCATACTTCTTTTC 11448 || | || | ||| | ||||| ||| | ||||| || | | ||| || Sbjct 1251 TTTAGAGTATTTTCTCTTTCATCATTTCCTCCACCTGCAAAACCTCCCTTTGATCTCTTT 1192 Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 | |||| ||||| |||||||||||||| |||||| | ||| || || | ||| Sbjct 1191 CTCCCAACAGCATCTATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGA 1132 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 ||||| || ||||||||| || |||| |||||||| | ||||| || || || Sbjct 1131 GAAAATAATTCTCGGACTCTTGATGGTCCTATTCCTACAAATACTTCAATAAA--ATCAC 1074 Query 11569 ---CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGT 11625 | | || | | || ||||||||| || ||| || || | ||| |||||| | | Sbjct 1073 TTCCACTAATATTAAA-AAAAGGAACATTAGCTTCTCCAGCAACAGCTTTTGCTAATAAT 1015 Query 11626 GTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||| || || || ||| ||| |||||||||||| |||||||||| ||||| Sbjct 1014 GTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACC 959 >seq3191 Length=936 Score = 96.9 bits (106), Expect = 4e-15 Identities = 196/289 (68%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 6708 CATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAA 6767 |||||||||| ||||| || | || | ||||||||| ||| || || || | ||| | Sbjct 805 CATTTGCATCTACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGGGGCTGGTGGTA 746 Query 6768 TACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC----GCCTTCTTACGTTCA 6823 |||| ||||||||||| ||| ||| | |||| ||| ||| | | | ||| Sbjct 745 TACCAACTAAATCAAATGAACC---TAACATTTTAT-TGTCACATGCCATTTCTCTTTCT 690 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 |||| | | ||||| || | || || |||||||||| ||| ||||| || | ||| Sbjct 689 CCTTGAAATACTTTGATACTGACTTGAGTTTGATTATCTGCTGCAGTTGAAAATACTTGA 630 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| || | |||||| || |||||||| ||| | || | || |||||| | Sbjct 629 GATTTTTTGGTTGGAATAGTTGTATTTCTATTAATTAATTTTGTAAAAACACCACCTAAG 570 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 ||||| | || | ||| | |||| | || || || ||||| | |||| Sbjct 569 GTTTCAATACCTAAAGATAAAGGTATAACATCTAATAGTAATAAATCTT 521 >seq4454 Length=7104 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/235 (70%), Gaps = 11/235 (5%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAA-ATGAAACTCCA----C 22495 ||||||||| | || || |||||||| | || ||||| ||| || || ||| | Sbjct 5229 AAATTTTATAATGCCTCAACATCAGAATTATATGGTAA--TAATATTCAAAGCCAATGTC 5172 Query 22496 AAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTG-ATGGG- 22553 | |||||||||||||| ||| | || |||||| ||||| ||| ||||| || | Sbjct 5171 ATAATGAAAATACACCATTTAATCCAGTTTCACCTTATGGCACAGCAAAATTATATAGTC 5112 Query 22554 ATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAAT 22613 ||| | ||| |||||||||||| |||| ||||||| ||||||||| | Sbjct 5111 ATAATATA--ACAAAAAATTATAGAGAAGCATATAATATGTTTTGTGTTAATGGTATATT 5054 Query 22614 GTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACA 22668 || ||||| ||| || ||||| ||||||| || || ||| |||||| ||| Sbjct 5053 ATTTAACCATGAAAGTCCAAGACGTGGTGAAACATTTGTTACAAAAAAAATTACA 4999 >seq7405 Length=623 Score = 82.4 bits (90), Expect = 1e-10 Identities = 148/214 (69%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||||||||| || || || |||| || || || || | |||||||| | ||| Sbjct 406 ATCAAAATCTTCACCTCCTAAATGAGTATTTCCTGCTGTTGCATATACTTCAAATACACC 465 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || ||| | ||||||||||| |||||||| |||| ||| | | | || Sbjct 466 ATTATCTATAACTAAAATAGAAACATCAAATGTACCACCTCCCAAATCATATACTAATAT 525 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || |||| || ||||| | ||| || || | ||| || || || ||||| Sbjct 526 ACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTAAAGCAGCAGCGGTGGGTTC 579 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAAT 7668 |||||||||||| || | | || | |||||||| Sbjct 580 ATTAATAATACGTAATATA-TTTAAACCAGCAAT 612 >seq2835 Length=4028 Score = 82.4 bits (90), Expect = 1e-10 Identities = 283/439 (64%), Gaps = 2/439 (0%) Strand=Plus/Minus Query 183142 TGGTATATATGAACTAAATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGG 183201 ||| ||| |||| | |||| || || || |||||| |||||||| | || || || Sbjct 3433 TGGAATAAATGATGAATATCCAGTTCCTATTCCTTCACAGCCATTTACTAGAATCGTAGG 3374 Query 183202 TAATATAGGAACATAATAGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAA 183261 | | || | |||||| | ||||| |||| || || || || | | ||| ||||| Sbjct 3373 AATAACTGGTATATAATATTGTGGTTCTATTTTTTGTCCCTCTTCATTTAAATATTTTAA 3314 Query 183262 TACTGGATCATCTTTGGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATAT 183321 | |||||||| | || ||| | |||| | | | | | |||||||||||| Sbjct 3313 AATCGGATCATCATATTCATTAAATATACTTCTAGTGGATGATGCAAGTTTTGTAAATAT 3254 Query 183322 ATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGG 183381 ||| || | | | || ||||||||||| | |||||||||| || ||||| Sbjct 3253 ATATCTAGCTGCAGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCGCATGG 3194 Query 183382 TTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATC 183441 ||| | ||||| || ||||| || || ||| | || || | |||| ||| || | Sbjct 3193 TTCTAAAAAATTTATGTTATTTGAACCAACAAATGTTTGAGCCATATTTATAATAGTTTG 3134 Query 183442 TGCCAAAGA-GACTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATT 183500 | || || ||| || || || ||||| | | | ||| | || || | | | || Sbjct 3133 TTGTAATGATGAC-TCTCCATGATGATATGCACTATGTTCTGCAATATAACCTACAAGTT 3075 Query 183501 GCGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTT 183560 | ||||| || |||| | | | ||| || | || || | ||||| ||||||| || Sbjct 3074 GAGCAACTTTACATTCATTTCTTAAATTTCTTTTAAAGCAACCATATAAAACTTTTCTTT 3015 Query 183561 GGGATGGTTTTAAACCATC 183579 | ||||| | ||||| Sbjct 3014 GTCCGGGTTTCCATCCATC 2996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635073423022360