Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3938 342 4e-88 seq2202 306 3e-77 seq7238 183 2e-40 seq2835 178 1e-38 seq2267 178 1e-38 seq3191 145 6e-29 seq4057 141 7e-28 seq4361 136 3e-26 seq1355 134 1e-25 seq4509 132 4e-25 seq5033 96.9 3e-14 seq4931 96.9 3e-14 seq3673 87.8 1e-11 >seq3938 Length=9879 Score = 342 bits (378), Expect = 4e-88 Identities = 574/824 (70%), Gaps = 25/824 (3%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 || ||| | ||| | ||||| ||||||||||||||| | | ||| | ||||||||| Sbjct 3319 GGTGATACCCATTTAGGTGGTGAAGATTTTGATAATCGTTTAGTAAATTTTTGTGTTGAA 3378 Query 551850 GATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 ||||||||| ||||||| | || ||| |||| | | | | ||| | | | Sbjct 3379 GATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAGAAGA 3438 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 ||||||| ||||||||||| ||||| | | || ||| ||| ||| | || ||| Sbjct 3439 TTAAGAACACAATGCGAAAGAGCAAAACGTACATTATCTTCTTCTACACAAGCTACCATT 3498 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | || || | ||||| || |||||||||| | || | || || | |||| Sbjct 3499 GAAATTGACTCCCTTTTTGAAGGTATTGATTATAGTGTTACTGTAAGTAGAGCTAGATTT 3558 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||| |||| |||||| | || | ||| || ||| ||||||||| | Sbjct 3559 GAAGAATTATGTATTGATTATTTTAGAGACACTTTAATACCTGTTGAAAAAGTTTTAAAA 3618 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | | ||| |||||| | || |||||| |||| | |||||||| || |||||| Sbjct 3619 GATGCTATGATGGATAAAAAGAGTGTTCATGAAGTTGTATTAGTTGGTGGTTCAACAAGA 3678 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAAT----TAAA 552199 ||||| ||||| | ||| |||| | ||| ||||| ||| || || | Sbjct 3679 ATTCCAAAAATCC---AAACATTAATAAAAGAATTCTTTAATGGAAAAGAAGCATGTAGA 3735 Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 | || | ||||| ||||| |||||||| |||||||| || ||||||| ||||| | Sbjct 3736 TCAA----TAAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATT 3791 Query 552260 TTCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGT-TACTCCTC 552315 |||||| ||| | ||| | ||||| || | || | ||||||| | |||| Sbjct 3792 ATCTGGAGATCAATCAAATGCAG---TACAAGATTTATTATTATTAGATGTATGTTCCT- 3847 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||| | || |||||||| | || ||| |||||||||| | || || |||||||| | Sbjct 3848 TGTCTTTAGGATTAGAAACTGCAGGTGGTGTTATGACTAAATTAATTGAAAGAAATACAA 3907 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || || ||||||| | ||||| | || ||| | ||||| ||| | | ||| Sbjct 3908 CAATCCCAGCTAAAAAAAGCCAAATATTTACAACATATGCTGATAACCAACCAGGTGTAT 3967 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 ||| ||| | | |||||| |||||| || || |||||||||||| | | || | | Sbjct 3968 TAATACAAGTATATGAAGGGGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGAAAAT 4027 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || ||||||| || ||||| ||||||||| | |||||| ||||||||||||||||| | Sbjct 4028 TTCATTTAGATGGAATTCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACTTTTG 4087 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 |||| ||||| ||||| ||||| ||||| || ||| ||| ||| Sbjct 4088 ATATTGATGCAAATGGTATTTTAAATGTCACAGCTGTTGAAAAA 4131 Score = 268 bits (296), Expect = 7e-66 Identities = 397/555 (72%), Gaps = 12/555 (2%) Strand=Plus/Plus Query 549979 GTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTG 550038 |||||||| ||||||||||||| ||||| || ||||||||| ||||||||||| || Sbjct 2652 GTCAAACA---TAGCTATAGGTATTGATTTGGGTACCACATATTCCTGTGTTGGTGTATG 2708 Query 550039 GCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTA 550098 | ||||| || || || || ||||| || || |||||||| ||||| || ||||| || Sbjct 2709 GAGAAATGAAAATGTCGATATAATTGCAAACGACCAAGGTAATAGAACAACCCCATCCTA 2768 Query 550099 TGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGG 550158 ||| |||| || || || ||| ||| |||| |||||||| ||| |||||| | | Sbjct 2769 TGTAGCTTTTACCGACACAGAAAGATTAATTGGAGATGCAGCTAAAAATCAAGTTGCAAG 2828 Query 550159 TAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC 550218 ||||| ||||| | |||||||| ||| | ||||||||||| | |||| || || Sbjct 2829 GAATCCAGAAAATACAGTATTTGATGCAAAAAGATTAATTGGAAGGAAGTTTACAGAATC 2888 Query 550219 GACTGTTCAGGCAGATATGAAGCATTGGCC-TTTCCAAATTGTTAATGT-TTCTGGAAAA 550276 |||| || |||||||| |||||||| ||| || | | || || ||||| Sbjct 2889 TTCTGTACAAAGTGATATGAAACATTGGCCATTTACAGTAAAATCAGGTATTGAAGAAAA 2948 Query 550277 CCTTAT-ATTGAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAAT 550332 | || ||||||| | | || |||| | || ||| ||||| || ||| |||| Sbjct 2949 GCCAATGATTGAAGTTGTTTATCAAGG---CGAAAAGAAATTATTTCATCCTGAAGAAAT 3005 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGT 550392 || |||||||||||| ||||||||| ||| || || ||| | || || | Sbjct 3006 ATCTTCTATGGTTTTACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTAT 3065 Query 550393 TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAA 550452 | |||| || || || ||||| |||||||||||||| || ||| | ||||| || || Sbjct 3066 AAAAAATGCTGTTATTACAGTACCTGCATATTTTAATGATTCTCAAAGGCAAGCAACAAA 3125 Query 550453 AGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGC 550512 ||||||||| ||||| || | |||||| | | ||||| |||||||| ||||| || Sbjct 3126 AGATGCTGGTACAATTGCAGGGTTAAATGTTATGAGAATTATAAATGAACCAACTGCAGC 3185 Query 550513 TGCACTTGCATATGG 550527 || |||||||||| Sbjct 3186 AGCTATTGCATATGG 3200 Score = 98.7 bits (108), Expect = 8e-15 Identities = 204/299 (68%), Gaps = 15/299 (5%) Strand=Plus/Minus Query 361543 ATAATCTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGCTAATGTTCTAAATA 361601 || ||| | |||||||||||||||||| ||| ||| ||| || | ||| ||| Sbjct 3354 ATTATCAAAATCTTCACCACCTAAATGGGTATCACCTGCTGTTGCCTTAACTTCAAAAAT 3295 Query 361602 AGCCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGA 361661 | |||| | |||| | | | ||||||| | ||| || | |||||||| | || | Sbjct 3294 A-CCATCTTCAATAGTAAGTAATGAAACATCAAATGTACCACCTCCTAAATCGAAAATTA 3236 Query 361662 TAATATTCCCCCCGTTTTTAT--TTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGA 361719 |||||| ||||| | |||||| ||||| | | |||||| || | | Sbjct 3235 AAATATT-------TTTTTCTCCTTTTCCTT-TTTTATGT---AAACCATATGCAATAGC 3187 Query 361720 AGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATC 361779 || || |||||||| || || ||| | |||||||| | || || ||| | ||||| Sbjct 3186 TGCTGCAGTTGGTTCATTTATAATTCTCATAACATTTAACCCTGCAATTGTACCAGCATC 3127 Query 361780 TAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTT 361838 | || ||||| | ||| | |||||||||||||||||| || ||||| || || |||| Sbjct 3126 TTTTGTTGCTTGCCTTTGAGAATCATTAAAATATGCAGGTACTGTAATAACAGCATTTT 3068 >seq2202 Length=5960 Score = 306 bits (338), Expect = 3e-77 Identities = 527/766 (69%), Gaps = 29/766 (4%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || |||||||||||||| | | |||| | |||||| |||| | ||||| || || Sbjct 1550 AGAGCCAAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAA 1609 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| ||| |||| ||| ||| |||| | |||||||||| | || || Sbjct 1610 AAAGTATTAGATGATGCAAAATATGAAAAAAGCAAAATTGATGAAATTGTTTTAGTAGGA 1669 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAA 552193 || || || | || |||||||| | |||| |||| ||| ||||||||||||| | Sbjct 1670 GGTTCAACTCGTATACCTAAAATCCAACAAATTATTAAAGACTT-TTTCAATGGTAAAGA 1728 Query 552194 ATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGC 552253 | ||| | || ||||||||||||| || || || ||||||||||| |||||||||| Sbjct 1729 ACCCAATAGAGGTATTAATCCAGATGAAGCAGTAGCATATGGTGCCGCTATTCAAGCAGG 1788 Query 552254 TATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCC 552313 ||| ||| ||| ||| || ||||| || ||||| | ||||||||||||| Sbjct 1789 TATCATTTTAGGA---------GAAGAATTACAAGATGTTGTATTATTAGATGTTACTCC 1839 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 || || | ||| | ||||| |||||||||||||||||| | | || | |||||||| Sbjct 1840 ATTAACTTTAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATAC 1899 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGT 552433 ||| || |||||||| | |||||| || ||| |||||||||| | ||||| Sbjct 1900 AGTTATCCCAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGT 1959 Query 552434 TACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTAC 552493 | ||||||| ||||||||||||||||| ||| |||||||||||| || | | || | Sbjct 1960 TTTAATTCAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAATCATTTATTAGGAAA 2019 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| | ||| ||| || || || || | | || ||||| ||||||||||||| || Sbjct 2020 ATTTGAATTATCAGGAATACCACCAGCACAAAGAGGTGTACCTAAAATTGAAGTTACATT 2079 Query 552554 CGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAAC----A 552609 | ||||| ||||| ||||| |||| || ||||| || ||| | Sbjct 2080 TACTGTCGATAAAAATGGTATTTTACATGTAGAAGCAGAAGATAA----AGGAACTGGAA 2135 Query 552610 AGAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAAC 552669 | |||||| ||| ||| || | |||||||| | | |||||||| || Sbjct 2136 AAAGTAAAGGTATAACTATTACTAATGACAAAGGTAGATTATCAAAAGAACAAATAGAAA 2195 Query 552670 GTATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGATAA-----TAAGAGAAAATCTGC 552724 ||| | | || ||| || |||||| || | ||||| |||||||||| Sbjct 2196 AAATGATTAATGATGCTGAAAAATTTGCTGATGAAGATAAAAATTTAAGAGAAAA----- 2250 Query 552725 TGTCGATGCCAAGAATGATTTAGAAAATTATATTCACAGTGTCAAA 552770 || || | || ||| ||||||| |||||||| || ||| | ||| Sbjct 2251 AGTTGAATCAAAAAATAATTTAGATAATTATATCCAAAGTATGAAA 2296 Score = 172 bits (190), Expect = 4e-37 Identities = 374/551 (68%), Gaps = 14/551 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| |||||||| || || ||||||||||||||||| | ||||||| | ||| Sbjct 680 TATTGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 739 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC----A 550109 |||||| | ||||||| |||||| | | ||| ||||| |||||||| || | Sbjct 740 TGAAATATTAAACAATGATTTAGGTAATCGTATTACACCATCATATGTTTCATTTGTTGA 799 Query 550110 CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCA 550169 ||| | ||| | |||||||| ||||| |||| |||| ||| |||| || Sbjct 800 TGGAGAAAGAAAA----GTTGGTGAAGCAGCTAAATTAGAAGCTACTTTACATCCAACTC 855 Query 550170 ATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGG 550229 | ||| | ||||||| |||| | | ||||| || | ||| |||| || Sbjct 856 AAACTGTATTTGATGTTAAAAGACTTATTGGTAGGAAATTTGATGACAAAGAAGTAGCAA 915 Query 550230 CAGATATGAAGCAT-TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||||| ||| | | || | |||| || || | || ||||| |||| | Sbjct 916 AAGATA-GAACTTTATTACCATATGAAATAGTAAACAATGAAGGTAAACCAAATATAAGA 974 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTT 550347 | | | || || || | | |||| |||| || |||||| |||||||||| Sbjct 975 GTT-CAAATAAAAGACAAACCCACTACTTTTGCACCTGAGCAAATTAGTGCTATGGTTTT 1033 Query 550348 AATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | ||||||||| ||| || || | | ||| | ||| || ||| | |||| || Sbjct 1034 AGAAAAAATGAAAGAAATTGCTCAAT-CATTTTTGGGTAAACCAGTAAAAAATGCTGTTG 1092 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | |||||||| || ||||||||||| ||||| | |||||||| ||||||||||| | Sbjct 1093 TTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGGTGCAA 1152 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | ||| | | |||||||| |||||||| || |||||||| | || |||| Sbjct 1153 TTGCTGGTTTAAATATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAGCTTATG 1212 Query 550527 GACTTGATAAA 550537 | | |||||| Sbjct 1213 GTTTAGATAAA 1223 Score = 118 bits (130), Expect = 9e-21 Identities = 285/420 (68%), Gaps = 26/420 (6%) Strand=Plus/Minus Query 361431 TTTTGGCATTTTCAACAGCattttttaatttt--aattgagctaattta-ctgaactcga 361487 |||| ||| ||||||| | ||| |||||||| ||| |||| |||| |||| || | Sbjct 1470 TTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT--AGCTCTTTTATCTGATCTA-A 1414 Query 361488 gttttcgtattttatattttttttGAAAATCAAGTATTACATGATTCATGATTAAATAAT 361547 | | | || |||| |||||||| ||| ||| | || || ||| | | | || Sbjct 1413 GATCT---ATATTATTTTTTTTTTTAAACATTTTTATAAAATAATCCATAACTCTTTGAT 1357 Query 361548 CTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGCTAATGTTCTAAATAAGCCA 361606 | | ||||||||| |||||||| ||| | || ||| ||| || | ||||| ||| Sbjct 1356 CAAAATCTTCACCTCCTAAATGAGTATTTCCTGCTGT-TGCATATACTTCAAATACACCA 1298 Query 361607 TTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAATA 361666 |||| ||| | | | ||||||| | ||| || | || |||||||||| ||||| Sbjct 1297 TTATCTATAACTAAAATAGAAACATCAAATGTACCACCTCCCAAATCATATAC--TAATA 1240 Query 361667 TTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGCT 361726 | | | ||| || || ||||| || || |||||||||||| | |||||| Sbjct 1239 TACT-----TGTTTCTTCTT-----TTTTA--TCTAA-ACCATAAGCTAAAGCAGCAGCG 1193 Query 361727 GTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTG 361786 || ||||| ||||| || | | ||| | || || ||| |||||| || Sbjct 1192 GTGGGTTCATTAATAATACGTACTATATTTAAACCAGCAATTGCACCAGCATCTTTTGTA 1133 Query 361787 GCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACTTGT 361846 ||||| | |||||||||||||||||| ||||| ||||||| || || |||| ||| || Sbjct 1132 GCTTGTCTTTGTGCATCATTAAAATAAGCAGGTACAGTAACAACAGCATTTTTTACTGGT 1073 Score = 104 bits (114), Expect = 2e-16 Identities = 164/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 360847 TCCTGTCAAATCAAATGTCCCAACATGAAA-ATTATGTTTAGTTAATTTTCTTTCGCCCT 360905 ||||| || |||||| | || | || || ||||| |||||||||| |||||| || | Sbjct 2035 TCCTGATAATTCAAATTTTCCTA-ATAAATGATTATCTTTAGTTAATGCTCTTTCTCCTT 1977 Query 360906 CAAATATTTTAATGCTAACAGTATCTTGATAATCAGTGTCTGTGGAAAATATTTTAGttt 360965 |||| | || ||| ||||| ||||| ||| | ||| |||||| ||| | || Sbjct 1976 CAAAAACTTGAATTAAAACAGCTGGTTGATTATCTTGATATGTTGAAAATGTTTGTGATT 1917 Query 360966 ttttAGTAGGAATTACTGTATTTCTTGGTA-TAATTGTAGTCATTTGGCGCTGTAA-AGT 361023 |||| || || || |||||||||||| | |||||| |||||| | || || ||| Sbjct 1916 TTTTTGTTGGGATAACTGTATTTCTTTTAATTAATTG-AGTCATAATAC-CTCCAACAGT 1859 Query 361024 TTCAACTCCTAACGATAAAGGAGTAATATCTAATAACACTAAATTTT 361070 ||||| ||||| | ||| ||||||| ||||||||| || | || || Sbjct 1858 TTCAATACCTAAAGTTAATGGAGTAACATCTAATAATACAACATCTT 1812 >seq7238 Length=1513 Score = 183 bits (202), Expect = 2e-40 Identities = 280/392 (71%), Gaps = 12/392 (3%) Strand=Plus/Plus Query 549979 GTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTG 550038 |||||||| ||||||||||||| ||||| || ||||||||| ||||||||||| || Sbjct 1100 GTCAAACA---TAGCTATAGGTATTGATTTGGGTACCACATATTCCTGTGTTGGTGTATG 1156 Query 550039 GCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTA 550098 | ||||| || || || || ||||| || || |||||||| ||||| || ||||| || Sbjct 1157 GAGAAATGAAAATGTCGATATAATTGCAAACGACCAAGGTAATAGAACAACCCCATCCTA 1216 Query 550099 TGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGG 550158 ||| |||| || || || ||| ||| |||| |||||||| ||| |||||| | | Sbjct 1217 TGTAGCTTTTACCGACACAGAAAGATTAATTGGAGATGCAGCTAAAAATCAAGTTGCAAG 1276 Query 550159 TAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC 550218 ||||| ||||| | |||||||| ||| | ||||||||||| | |||| || || Sbjct 1277 GAATCCAGAAAATACAGTATTTGATGCAAAAAGATTAATTGGAAGGAAGTTTACAGAATC 1336 Query 550219 GACTGTTCAGGCAGATATGAAGCATTGGCC-TTTCCAAATTGTTAATGT-TTCTGGAAAA 550276 |||| || |||||||| |||||||| ||| || | | || || ||||| Sbjct 1337 TTCTGTACAAAGTGATATGAAACATTGGCCATTTACAGTAAAATCAGGTATTGAAGAAAA 1396 Query 550277 CCTTAT-ATTGAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAAT 550332 | || ||||||| | | || |||| | || ||| ||||| || ||| ||| Sbjct 1397 GCCAATGATTGAAGTTGTTTATCAAGG---CGAAAAGAAATTATTTCATCCTGAAAGAAT 1453 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAA 550364 || ||||||||| || ||||||||| ||| Sbjct 1454 ATCTTCTATGGTTNTACAAAAAATGAAAGAAA 1485 >seq2835 Length=4028 Score = 178 bits (196), Expect = 1e-38 Identities = 410/607 (68%), Gaps = 23/607 (4%) Strand=Plus/Minus Query 428095 TGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGC 428154 |||||| || ||||| |||||||| |||||||| |||||| | ||||| |||||| Sbjct 3421 TGAATATCCAGTTCCTATTCCTTCACAGCCATTTACTAGAATCGTAGGAATAACTGGTAT 3362 Query 428155 ATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATC 428214 ||||||||||||||| || ||| ||||||| | | | |||||| | ||| Sbjct 3361 ATAATATTGTGGTTCTATTTTTTGTCCCTCTTCATTTAAATATTTTAAAATCGGATCATC 3302 Query 428215 ATGCTCGATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCGCT 428274 || || ||||||| || ||| || |||||| |||||| |||||||| || Sbjct 3301 ATATTCATTAAATATACTTCTAGTGGATGATGCAAGTTTTGTAAATATATATCTAGC--- 3245 Query 428275 TGCGGA---ATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAA 428331 ||| || ||||||||| ||| ||||| | ||||||||||| || || || Sbjct 3244 TGCAGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCGCATGGTTCTAAAAA 3185 Query 428332 ATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTT--AAG 428389 ||| || ||||| || ||| | |||| |||||||| | ||| || | ||| || Sbjct 3184 ATTTATGTTATTTGAACCAACAAATGTTTGAGCCATATTTATAATAGT--TTGTTGTAAT 3127 Query 428390 GATTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACC 428449 ||| || |||||||||||| | | || || || |||| | || | || Sbjct 3126 GATGACTCTCCATGATGATATGCACTATGTTCTGCAATATAACCTACAAGTTGAGCAACT 3067 Query 428450 TTTATTTCTTCTTTATAAATACCTTCTTCTACTG-ATCCATAAAATACTTTGCGTTGTGA 428508 || ||| | || ||||| ||||| || | | ||||| || ||||| | |||| Sbjct 3066 TTACATTCAT-TTCTTAAAT---TTCTTTTAAAGCAACCATATAAAACTTTTCTTTGTCC 3011 Query 428509 TGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAATGA 428568 ||||| |||||||||||||||| |||||| |||| | |||| | ||||| | Sbjct 3010 GGGTTTCCATCCATCCATAATATTCGGTATACTTCTTTCTGTGTCAT--ATCTAGAATAA 2953 Query 428569 T--ATTAGTTCTTGATGAATGAAATCATAATATGATACTCGTTTTTGTGCATTATCAATG 428626 | |||| ||||| || | |||||||||||||||| |||| | || ||||| Sbjct 2952 TAAATTAATTCTTTATTTACAAAATCATAATATGATAAATCCTTTTCTTTATGATCAACA 2893 Query 428627 TAATTGTTGGGATTAT--AAGTATTTACCCATATTTTTCGATCATTTTCTCtttttttAT 428684 || || | ||| || | | || ||||| ||||||||| | |||||||||| Sbjct 2892 TA--TGAACCAAGTATAAAATTTTGTAGCCATAATTTTCGATCTTCAATTCTTTTTTTAC 2835 Query 428685 CAAAAGC 428691 |||||| Sbjct 2834 TAAAAGC 2828 >seq2267 Length=4651 Score = 178 bits (196), Expect = 1e-38 Identities = 833/1312 (63%), Gaps = 51/1312 (4%) Strand=Plus/Plus Query 684506 ATTCCATAAATCAAATTGGAATTTTCCTTTGGAAAGAGGACTTCCTATAAATGTTTCATA 684565 |||||| | ||||||||| ||| |||||| | ||||| || || ||| |||||| Sbjct 2405 ATTCCACATATCAAATTGTAATATTCCTTGGCTTGCTGGACTACCCTTATATGATTCATA 2464 Query 684566 AGCACCAAATTCTTTGGATAATTTCATTGATTCTTCCAGACAACCAAAATAAATAGTTTC 684625 | |||| | ||| | ||||| | || ||| | | || |||| || || || Sbjct 2465 TGGACCATGTACTTGTGCTAATTCAACAGACATTTCTAAAGCCGCATAATACATTGTCTC 2524 Query 684626 AAATATTTTACGATTGAGATCGCGAGCCAATTCAGAATCAAATGG-TGTTTTAAAAATCG 684684 ||||||| | ||| | || ||| ||||| ||| |||| | | |||||| | Sbjct 2525 AAATATTCTTTTATTTAATTCTTTAGCTTCGTCAGATTCATATGGATATCTTAAAA---G 2581 Query 684685 CAAAAAC--ATCCGCTACTCCTTGGACACCAACACCAATTGGCCTATGTTTAATATTAGA 684742 || ||| ||| |||| |||||| || || | ||||| || | ||| | |||| || Sbjct 2582 CATAAATGTATCTGCTAATCCTTGTACTCCTATTCCAATAGGTCGATGCCTTTTATTTGA 2641 Query 684743 TACACGTGTTTTATCAACTGGATAAAAATTAATATCAATAACATTATTAAGATTTCTTGT 684802 | | || | || ||| ||| |||| | ||||||| |||| | |||||| || Sbjct 2642 TTTTTCAGCTTCTTTAATTGGGTAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGT 2701 Query 684803 CATAATTCCTGACACTTTCCGTAACATATCATAATCGAATTCTGGTACTCCATTTTTATG 684862 |||||| | | | ||| | | | ||| |||||| | |||| | Sbjct 2702 AATAATTTTAGTAATATCATATAATTTTTTAAAATTAAATTCTTTT-------TTTTCTC 2754 Query 684863 TATTATGAATCTGGGAAGA--CATATTGATGACAAATTACAAGTGGCATATTCATCCGCT 684920 ||| | || | | | || ||||| | |||||||||| || |||||| | | Sbjct 2755 TATCAACAAATTTACATAATGCA-ATTGAAGCCAAATTACAAACAGCTACTTCATCAGGT 2813 Query 684921 GATGAGTATTCTACAATTTCCGAACAAAGATTTGATCCATT-AATAACGCCAACATTAAT 684979 || | |||||| | ||||| |||| | | || | |||| ||| || | ||| | Sbjct 2814 GAGGTGTATTCAATTATTTCACAACATA-AGTTACTACATTTAATTGTTCCTAAATTTTT 2872 Query 684980 TTGATTGGACTTATAATTAACAGCATCTTTAAAAACAATATATGGTACTCCGGTTTCAAT 685039 |||||| || ||| |||| ||||||||| | | ||||||||||| || |||||||| Sbjct 2873 TTGATTAGATTTAGAATTGCATGCATCTTTATATAACATATATGGTACACCAGTTTCAAT 2932 Query 685040 TTGTGTTTCCATAATTTTAAACCATAAATCACGAGCAGATA----TTTGTTTCATATATT 685095 ||| ||| | || |||||||||||| | ||| | ||| |||| || ||| Sbjct 2933 TTGACTTTGTAATATAGCAAACCATAAATCTTGTGCAAGGACTGTTTTTTTTCCTAAATT 2992 Query 685096 TACCTGATTTTTCATAACTCAAATATGTTTCATTAAATTCAGTACC---ATATTTACCAA 685152 | | || |||||| | |||| | | |||||| || | ||| || | Sbjct 2993 TTC----TTCTTCATATTTTGTATATAACTTTTCAAATTCGTCTCCCCAAGATTCACTTA 3048 Query 685153 CAATATTTGGACATTCAGATGGACACATCAAGGACCATACTCCATCTTCTCGTACTCGCT 685212 | |||||||||| |||||||| || | ||| | || |||| ||||| | Sbjct 3049 AACC---TGGACATTCATTAGGACACATTAAAGTCCAGTTTTTATTTTCTTTTACTCTTT 3105 Query 685213 CAATAAATATATCATTNNNNNNNNNNNCTAAAAACAAATCTCTGGCTCTTTCAGTTTCCG 685272 ||||||| |||| | |||| ||||||| |||||| ||| Sbjct 3106 TCATAAATAAATCAGGTACCCAAATAGCATAAAATAAATCTCGAGCTCTTAATTCTTCTT 3165 Query 685273 CTCCTGTAttttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATAT 685332 || ||||||| | | ||| | || | ||||||||| |||||| || || |||| Sbjct 3166 TACCATGATTTTTTCTTAAATCTAAAAATTCAAAAATATCTGAATGCCATGGCTCTATAT 3225 Query 685333 AAATAGCAAATGAACCAGCTCTTTTGCCTCC---TTGATTGGCATACCTCGATATATTAT 685389 | | ||||| || || |||||| ||||| ||||| ||||||| | ||| || Sbjct 3226 ATACTGCAAAAGATCCTTTTCTTTTCCCTCCACCTTGATCTACATACCTTGCCGTATCAT 3285 Query 685390 TAAATACAGTTAATACTCG---TAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAAG 685446 |||| || |||| | | | || |||| ||| | | || | || ||||||||| Sbjct 3286 TAAAAACCCTTAACATTGGAACTAAACCATTTGATATACCATTAGTTCCTCTAATATAAG 3345 Query 685447 ATCCATCCGCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATCA 685506 | | | || |||| | ||| || || || || || || ||||||||||| Sbjct 3346 AATTCTGACCTCTTATATCTTGTACAGCAACTCCTATGCCGCCTGCTGTTTTACTAATCA 3405 Query 685507 TAGCACAATCTTTCCAACAATCACCAATTGCTCCCATATCATCT---TTTATTCCTAAAA 685563 |||||| | ||| | ||| || || | ||| |||| || || ||| | Sbjct 3406 AAGCACATTGTTTTAATGTTTCAAATATACCTTCAATAGAATCTGATTTCATAGATAATA 3465 Query 685564 GGAAACAGCTTGATAATTGT--TCATGAGTAGTTCCAGCATTAAATAATGTTGGTGTTGC 685621 | ||||| ||| | ||| || || | ||||| | |||||||||||| ||||| || Sbjct 3466 GAAAACAAGATGACATTTGCGGTCGTGGG--GTTCCTGAATTAAATAATGTGGGTGTAGC 3523 Query 685622 ATGAGTAAAATAACCCTGTGACAACATTTCATAAGTTTCAAATATTCTGTTTAGATCATT 685681 ||| || ||||| || |||| | | ||| ||||| || | | | ||||||| Sbjct 3524 ATGTGTGAAATATTTTTGAGACATTAAATGATATGTTTCTAAAGCTTTTTCAAGATCAT- 3582 Query 685682 ATTACGATAATGTATAGCAATTGCTACACGCATAAATAAATGTTGAGGTCTTTCTATGAT 685741 | || ||| || |||||| || | ||| |||||||||||||| | ||| || || Sbjct 3583 ----CTAT-ATGAATTCCAATTGACACTCTCATTAATAAATGTTGAGGACGTTCAATAAT 3637 Query 685742 TATTCCTTTAACtttttttAGATAACTTTGTTCAAGAGTTCTAAAACCAAAA 685793 | | |||| | | || ||| | |||| | |||| |||| |||||| Sbjct 3638 TTTATTATTAATTCGTAATAAATATGATCGTTCTAAAGTTTTAAATCCAAAA 3689 >seq3191 Length=936 Score = 145 bits (160), Expect = 6e-29 Identities = 257/374 (69%), Gaps = 12/374 (3%) Strand=Plus/Plus Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 ||||||||||||| |||||||| || || | || || || || |||| || | | | Sbjct 449 AAAGTGTTAATCCCGATGAGGCAGTAGCATTAGGCGCTGCTATACAAGGAGGTGTATT-- 506 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| || |||| || || || | |||| ||||||||| ||| ||||| Sbjct 507 ------AAAAGGA-GAAA---TAAAAGATTTATTACTATTAGATGTTATACCTTTATCTT 556 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| | ||||| | || ||| || | || || | || |||||||||| ||||||| Sbjct 557 TAGGTATTGAAACCTTAGGTGGTGTTTTTACAAAATTAATTAATAGAAATACAACTATTC 616 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | |||||||||| |||||||| || |||||||||||||| || | || Sbjct 617 CAACCAAAAAATCTCAAGTATTTTCAACTGCAGCAGATAATCAAACTCAAGTCAGTATCA 676 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || | ||| ||||||||||| || | | || ||||| | ||| | ||| ||| Sbjct 677 AAGTATTTCAAGGAGAAAGAGAAATGGCATGTGACAATAAAATGTTAGGTTCATTTGATT 736 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 ||| ||||| || || || || | || || || ||||||||||| || || ||| | | Sbjct 737 TAGTTGGTATACCACCAGCCCCAAGAGGTGTTCCACAAATTGAAGTCACATTTGATGTAG 796 Query 552562 ATGCCAATGGAATT 552575 |||| |||| |||| Sbjct 797 ATGCAAATGCAATT 810 >seq4057 Length=7914 Score = 141 bits (156), Expect = 7e-28 Identities = 326/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 |||||||| |||||||| || || ||| | || ||||||||| | |||| | | | Sbjct 4270 GATGGACCACCATTTGCTACTGGATTACCA--CACTATGGTCATTTATTAGCAGGAATAA 4213 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGAAG--GGTTACAAAGTTGATAGAAGAAA 367382 | ||||| ||| | |||||||| || || || || ||| || |||||| Sbjct 4212 TAAAAGATTGTGTAACTCGATATTTTT--ATCAATCTGGATATTCAGTAGAAAGAAGATT 4155 Query 367383 TTCTTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCGGAT 367438 | ||||||||||||||| | || ||||| ||| ||| ||| ||| |||| || Sbjct 4154 TGGATGGGATTGTCATGGATTACCTGTTGAATATGAAATAGAGAAAGAAAATAAT---AT 4098 Query 367439 ACACAACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTCGTA 367498 |||| |||||| ||| || | | ||||| || ||||||| | ||| | | Sbjct 4097 TAACAAAAAAGAAGATATTTTAAAAATG-GGAATAGATGTATATAATGAAAAATGTAGAA 4039 Query 367499 ATTTGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATT-TTGAACGTATTGGAAGATGG 367557 | | |||||||||| | || || ||| | || | ||||| | |||||||||||| Sbjct 4038 GTATAGTTTTAAAATATTCTAATGAATGGG-TAAATACCGTTGAAAGAATTGGAAGATGG 3980 Query 367558 ATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTGG 367617 ||||| | |||||||| |||||||| ||||||| ||||| |||||| |||| ||| Sbjct 3979 ATTGATTTTAAAAATGATTATAAAACTATGGATAAAAATTTTATGGAAAGTGTTTGGTGG 3920 Query 367618 GCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATAT 367677 ||||| |||||||| || | |||| | || | |||||| ||||||||| Sbjct 3919 ATATTTAGTCAATTATATAAAAAAAATTATATTTATAAATCATTTAAAGTTATGCCATAT 3860 Query 367678 TCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGT 367736 ||| | |||||||| || | || |||||||| || ||||||| ||| || Sbjct 3859 TCATGTAAATGTAATACACCTATATCGAATTTTGAATTAAATTTAAATTATAAAGATGT 3801 >seq4361 Length=5049 Score = 136 bits (150), Expect = 3e-26 Identities = 156/205 (76%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 930615 GATGAAATTCCTGCACCAATTATTCCTGATTTACCAAATAAAGTATTAATTGATTTTTCT 930674 |||||||||| || || || | | || ||| ||| | ||||| |||||||||||| Sbjct 1395 GATGAAATTCATGATGGAAATAATGC-GAAATACGAAA--ATGTATTGATTGATTTTTCT 1339 Query 930675 TCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATTATTGGAGAA 930734 |||||||||||||| |||||||||||| |||| ||||| | || ||||| | ||||| Sbjct 1338 TCACCAAATATTGCAAAAGAAATGCATGTTGGTCATTTAAGATCAACCATATTAGGAGAT 1279 Query 930735 TCTTTATGTAGATTATATGAATATTGTGGAAGT-AAAGTTCATCGAGTCAATCATATTGG 930793 | | || | | ||| ||||| || | |||| ||| ||| | | || ||| |||| Sbjct 1278 AGTATTTGCAAAATATTTGAAT-TTTTAAAAGTGAAAACACATACAATTAACCATGTTGG 1220 Query 930794 TGATTGGGGAACACAATTTGGTATG 930818 ||||||||||||||||||||||||| Sbjct 1219 TGATTGGGGAACACAATTTGGTATG 1195 >seq1355 Length=14656 Score = 134 bits (148), Expect = 1e-25 Identities = 241/346 (70%), Gaps = 6/346 (2%) Strand=Plus/Minus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| |||||||||| | ||||||| | | ||| | ||||||||| || | | Sbjct 4124 ATTCCATCTTCACCATATAAAAATTGAATAATATCACCATATGAATTTCTTACTGTTCGA 4065 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||| | ||| | | ||||| | ||||| |||| ||||||| ||||||||||| Sbjct 4064 TCATATTGTACCATCACATCTTCCATAGCTTTAATTAATCTTCTTTGTATATAACCAGTT 4005 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 |||| ||||||| ||||||| ||||||||||||||| ||| ||||| | || || ||| Sbjct 4004 TCTGAAGTTTTACAAGCAGTATCAATAATACCTTCTCTACCTCCCATAGCATGAAAAAAA 3945 Query 390991 AATTCCATAGGATTGAGTCCA--GAAATAAATGATCCAAAACAAAATCCTCTTGCAGAAG 391048 | ||| || | | ||| |||| || || | | || ||||||||| | Sbjct 3944 ACTTCTTGTGGTGTTAACCCACTTAAAT-AAGAATTCGATAC-AAATCCTCTACTTTCTG 3887 Query 391049 GACTATCATCATGTTGTGCAAACAT-AGGTAATGTTCTATTATTAAATCTTTTTTGAATT 391107 | | || |||| || || || || ||||||| ||||| |||||||| | ||||| Sbjct 3886 GCCCATAATCAAATT-TGATAAAATGTGGTAATGATCTATGATTAAATCCGAATGGAATT 3828 Query 391108 CGTTTATCTTCGACAATAACTTGTCCAATACATCCTGCAATCTGTG 391153 | ||| |||| ||| | ||| || | |||| | ||| |||| Sbjct 3827 CTTTTTCCTTCCACATTTTGTTGACCCACACATGATATAATTTGTG 3782 Score = 93.3 bits (102), Expect = 3e-13 Identities = 224/337 (66%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 393932 ATAACAAAATTAGCTCCTGGATATACACGACGTCCATTTTTTACTAATTGTGTTAAATAT 393991 |||| | | ||||||||||| || || | || ||| |||| | | |||||| Sbjct 2465 ATAATATATTTAGCTCCTGGCCATTCATATGGACCTCTTTCCACTAGCTTTTTTAAATTA 2406 Query 393992 TCAATGTTATGTTTTGTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGT 394051 ||| ||| | || ||| ||||| ||||||||| |||| |||| | || ||| Sbjct 2405 TCATAATTAAGGGGAGTAACAGTTTCACAAAATGTTAATGTCATAGCAACAGATTTAGGT 2346 Query 394052 AGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATA 394111 | || | | || | | | ||| ||||| ||||| ||||| | | |||| | Sbjct 2345 ACCCCTATATAATCTATATTTAAATTAGGATCACCAGTAATTACTGTTCTAGCTGAAAAG 2286 Query 394112 TCCACACGTTTTCCCATAAGATTTCCACGAATTCTACCTTCTTTACCTCGTAATCGTGAC 394171 || || | ||| ||||| | |||||| | | |||||||||||||||| |||| || Sbjct 2285 TCAACTCTTTTACCCATTAAATTTCCTCTCAATCTACCTTCTTTACCTTTCAATCTTGTT 2226 Query 394172 GACAAATCTTTTGTTAAtttttt--atttttttGCTGTGATCTTGGTAATCCTGATATAT 394229 | | ||||| || |||||| || ||| || | |||| | |||| ||||| Sbjct 2225 CTTATAGCTTTTATTGGTTTTTTAGATCGAGTTGTTGCAA--TTGGCATACCTGGTATAT 2168 Query 394230 CGTTCGCAAAAAATGTTGCAACATGATATTGTAATAA 394266 | || |||| ||||||| || |||| | |||||||| Sbjct 2167 CATTATCAAATAATGTTGTAATATGAAACTGTAATAA 2131 >seq4509 Length=6084 Score = 132 bits (146), Expect = 4e-25 Identities = 399/607 (66%), Gaps = 47/607 (8%) Strand=Plus/Minus Query 1047046 ATTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGA 1047105 ||||||||||||||||| ||| | ||| |||||||| || |||||| | ||||| | | Sbjct 1863 ATTGCTGATTGGTTTGCTCAACTTAATAATAAAATGTCTGGCGATTTAAATAAAATAAAA 1804 Query 1047106 GATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACT 1047165 | || || ||||||| |||||||||| ||| |||||||| |||||| | Sbjct 1803 AAAGTTGGACAATATTTTATTGAAGTATGGAAAAGTTGTGGTATGAATATGGAAAATGTT 1744 Query 1047166 AAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATG 1047225 ||||||| ||||| ||||| | ||| | || || ||||| || | || Sbjct 1743 CAATTTATGTGGGCAAGTGATGAAATAAATAAAAACCCTGATAAATA--CTGGTCTACTG 1686 Query 1047226 TTACATATTGCTA-ATCAGACATCTTTAGCA-----CGTGCTAAAAGATGTTGTCAAATT 1047279 | ||||| || |||| | |||| | | ||||||||||| || Sbjct 1685 T----TATTGATATATCAAGAAGTTTTAATATTAATAGAATTAAAAGATGTTTAACTATA 1630 Query 1047280 ATGGGACGTAGAGAAGGTGATG--AATTATCTTCGTCACAAATTATATATCCTTGTATGC 1047337 ||||| | | ||||| || | ||||| || || |||||| ||||||| ||||||| Sbjct 1629 ATGGGTAGAACTGAAGGGGAAGATAATTA--TTGTTCTCAAATTTTATATCCATGTATGC 1572 Query 1047338 AAGTAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTG 1047397 || || |||||||| |||||| |||| ||||| ||| | || | | Sbjct 1571 AATGTGCTGATATTTTCTTTTTAAAT---------GTTGACATTTGCCAATTAGGAATAG 1521 Query 1047398 ATCAAAGAAAAGTTAATATGTTAGCCATTGAATAT-----GCTAAACGTAATAATTTAAA 1047452 ||||||||||||| |||||| |||||| || ||| |||| ||||| ||| Sbjct 1520 ATCAAAGAAAAGTAAATATGCTAGCCAGAGAGTATTGTGATATAAAAAAAATAA--AAAA 1463 Query 1047453 AACACCAATTATTTTATCTCACCATATGTTAATGGG---ATTGAAAGGTTCCAAAAATAA 1047509 || ||| |||| || || || |||||| || ||| |||| ||| || || Sbjct 1462 AAAACCTGTTATCTTGTCGCATGGAATGTTACCAGGTTTATTAGAAGG--ACAAGAA-AA 1406 Query 1047510 AATGAGTAAATCTGATCCTGAAAAT---GCCATATTTATGGAAGATAGTCGTGAAGATAT 1047566 |||| |||||||| |||||| || || |||||||| |||| | | |||| | Sbjct 1405 AATGTCAAAATCTGA---CGAAAATTCAGCAATTTTTATGGATGATAATGAAGCAGATGT 1349 Query 1047567 ATTTaaaaaaaTACACAAAGCATATTGCACAGACGAAATTATTG---ATAATCCAATTTA 1047623 || |||||| | |||| |||||| | | || |||| ||||||| |||| Sbjct 1348 TAATAGAAAAATTAAAAAAGGCTATTGCCCTCCAAATATAATTGAAAATAATCCTATTTT 1289 Query 1047624 TGAATAT 1047630 || |||| Sbjct 1288 TGCATAT 1282 >seq5033 Length=4696 Score = 96.9 bits (106), Expect = 3e-14 Identities = 170/243 (70%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 393927 TTTTAATAACAAAATTAGCTCCTGGATATACAC--GACGTCCATTTTTTACTAATTGTGT 393984 ||||||||| | ||||||||||||| | || ||| |||||| ||| ||| | | Sbjct 3212 TTTTAATAATATAATTAGCTCCTGGCCAGACGTTTGAC--CCATTTCTTATTAACATTTT 3269 Query 393985 TAAATATTCAATGTTATGTTTTGTCACAATTTCATCAAATGTTAAATTCATTGCAATAAT 394044 ||| | ||| || |||| ||| | || ||||| | | ||||| ||||||| || || Sbjct 3270 TAATTTTTCTATATTATATTTATTAACTGTTTCAGGATAAGTTAATCTCATTGCTATTAT 3329 Query 394045 TTGTGGTAGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACC 394104 || |||| | ||||||| | | ||||| || || | | ||| || || |||| Sbjct 3330 TTTGGGTATAACAACTTCATCTATTGATATATTGGGGTCTGGAGAAATTACGGTTCGACT 3389 Query 394105 TGACATATCCACACGTTTTCCC-ATAAGATTTCCACGAATTCTACCTTCTTTACCTCGTA 394163 ||| | ||| || | |||||| ||||| || | | || |||||||||||| ||| || Sbjct 3390 TGAAAAATCAACTCTTTTTCCTGATAAG-TTACATCTAAATCTACCTTCTTTTCCTTTTA 3448 Query 394164 ATC 394166 ||| Sbjct 3449 ATC 3451 >seq4931 Length=1290 Score = 96.9 bits (106), Expect = 3e-14 Identities = 120/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAA-TAAGTCTTTGCT-GATCAGGAGGAATTCCTTCT 563376 |||||| | ||||||||| ||||||| | ||| |||| | | ||||| |||||||||| | Sbjct 1290 ATCTTCTAATTGTTTTCCAGCAAAAAATTAGTTTTTGTTTGGTCAGGGGGAATTCCTTTT 1231 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 ||||||||||||||| ||| || ||||| ||||| | || ||| || ||||| Sbjct 1230 TTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCGGATGGTTCAACA-TCAAGAGT 1172 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| || || | ||||| || || |||||||| Sbjct 1171 GATTGTTTTTCCGGTTAATGTTTTTACAAAGATTTGCAT 1133 >seq3673 Length=8284 Score = 87.8 bits (96), Expect = 1e-11 Identities = 242/358 (68%), Gaps = 21/358 (6%) Strand=Plus/Minus Query 399557 AAATT-ATATATAATATGACAAGGAGGTAATGCCAttt--ttttAAT-GTCGACAGGATT 399612 ||||| | ||| |||||||||||||||||||||||||| | | ||| | || ||| Sbjct 6442 AAATTGACATAAAATATGACAAGGAGGTAATGCCATTTGATCTAAATCTTTTAC---ATT 6386 Query 399613 CCATAAACTTATAATTATTCTGCGATCATTTGGATTATTCATAATAGCATCAATACAATT 399672 |||| || | ||| |||| | | | | |||| ||| |||| || ||| ||| Sbjct 6385 CCATGCACACAAAATAATTCGTCTACAAGTAGGATCATTTTTAATTAAATTTATAATATT 6326 Query 399673 ATTTAATTGATCAATTCCTTGATCATGATAATCTGTTTTACAATTATC---ATATTTGGC 399729 ||||||||||||| ||||| || | ||||| | | | || |||| ||||| || Sbjct 6325 TTTTAATTGATCAACTCCTTTGTCTTTATAAT-TATCATGCA--TATCTGTATATTCAGC 6269 Query 399730 TCCGAAATGTCTCATTTGAAATCCATAACCGGGGCCAATATC--TCCCGCCTCATAATTC 399787 || ||||| ||| ||||||||||||| || || | ||| | | ||| || | Sbjct 6268 ACCAAAATGCCTCCATTGAAATCCATAAATTGGACCGAGATCATTAACTTCTC-TA--TG 6212 Query 399788 AAATTA-TTACTT--TCTAAAAATTCTTTTGTCGAATTTTTATCCCAAATATGTACACCT 399844 |||| | || ||| ||||||||||| |||| ||| ||||| || ||| | Sbjct 6211 AAATAATTTTCTTTATCTAAAAATTCCCTTGTTCCATTAGCTTCCCATATTCTTACGTTT 6152 Query 399845 ACTTTTTGTAATTTATCAACATCAGTTTGCCCACGTATCATCCACATTAATTCTTCGA 399902 || | || ||| ||| |||| ||| | ||| | ||||| ||||||||||| Sbjct 6151 TTTTCTAACAAAGTATTTCCATTTGTTTCCCCTCTTATAAACCACAATAATTCTTCGA 6094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028900476749710